Gene Bcep18194_B1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1838 
Symbol 
ID3753603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp2103514 
End bp2105634 
Gene Length2121 bp 
Protein Length706 aa 
Translation table11 
GC content65% 
IMG OID637766687 
Productantibiotic ABC transporter permease 
Protein accessionYP_372596 
Protein GI78062688 
COG category[V] Defense mechanisms 
COG ID[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.804625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.506284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTTCA ATACGCGTAA AGTCCGTCCG GTCCTGCAGG ACGAGGTGAC GGAGTGCGGC 
CTGGCCTGCC TCGCGATGAT CGCGTCGTGG CACGGGCGCG AAACGACGTT GCGCACGCTG
CGCAACCGCT ATCCGGTCCG GATCGATTCC GGGCTGTCGT TCTTCGACCT GATGGAGATC
TCGAACGATC TCGGGCTGCG CGCACGCGGG CTGCAGTTCG ACGCGGGCGA GCTCGATGCG
CTCAAGACGC CATGCATCCT GCACTGGGGG ATGAACCACT ATGTCGTGCT GACGAAGGTC
GGCTACGGCA GCGTGCACAT CGTCGATCCC GCGCTAGGCG AAACGAAGCT GCCGCTCGCG
CAGGCGCTCA CGCACATCAC CGGCTACGCG CTCGAACTGA ATCCGGACAT CGGCTTCACG
CGGGCGGGGC AGGCCGACCG GATCCGGCTG CGCGACTACC TCGAAGGGCT GACCGGCATC
CGCAAGAGCC TCGCGATCGG CATCGCGGGC GGCGTCGCCG CGCAGCTCCT GCTGCTGCTC
GGCCCGTCGT ACGTGCAACT GACGATCGAC GAGGCGCTGA AGAAAACCGA CGTCGACATC
CTGTACCTGC TGACGATCCT GTTCGCGATC GTGTTCCTGT TCGACACGCT GTACGCGAAC
CTCGTCGGCA ACATCAAGAG CTACCTGCGC AACATCGTGT CGCAGCAGTT GTCGGCGAAC
ATGGTCGGGC ATCTCGCGCG GCTGCCGATC GGCTATTTCC TGTTCCACAA CACCGGCGAT
TCGATCTCGC GCGTGTCGTC GGTGTCGGAG GTCGGGCGCT TTCTCGTCGA CGGCCTCGTC
GGCGGGCTGC TCAATATCGT CACCTGCACG CTGACGCTCG TGCTGATGCT GTACTACAGC
CCGGTGCTGG CCGGCATCAG CCTGGCCGGG ATGGTGCTGT TCGCGCTGAG CCGGCTCGCG
ATCCAGCCGC AACTGCAGGA CGCGATGTCG CAGATCCTCA CGCGCGGCGC CGAAGCCGAC
GCGCTGCTGA TCGAGAACAT CCGCTCCGCG CATTCGATCA AGCTGCTGTC GGCCGAGACC
GCGCGCAGCA GCCTGTGGGT GAACGCGTTC ACGCAGAAGC TGCAGGCGAT GCGCCAGCAG
GAGCGGCTGC AGTTGCTGTT CGACGCGATC TCGAAGGGGA TCGTGCACGT CGAGCAGCTC
GTGATCGTCA CGTACGGCGC GTGGCTCGTG ATGCACGGCC AGAGCACGAT CGGCGTGATC
TACGCGTTCA TCCAGTACAA GAACCTGTTC GCCGACAAGT TCATCGACTC GATCCAGCTC
TATGTGCGCC GCAAGGTGCT GCAGGTGCAT ATGGACCGCG TCGCGGACGT GTTGCAGACC
GAGACCGAGG AGCCCGCGCC GGATGCTGTC GTGCGGCCGG TCGACGGCTT CGACGGCGCA
CTGTCGATCC GCGCGCTGTC GTACACGCCG AAGGGCGGCA ACCGCCCGAT CCTGCGCGAC
ATCGCGCTCG ACGTACCGGC GGGCAGCAAG ATCGCGATCG TCGGGCGCAC CGGCAGCGGC
AAGACGACGC TGCTGAACCT GATCTGCGGG CTCGTGCGGC CCGAGCCCGG CACGCTGTTC
GTCGGTGGTG TGGATCTCGT GGAAGTGAAC CTGCGGCAGT ATCGCAAGCA TCTCGCGGCC
GTCACGCAGT CCGACCAGCT GTTTCGCGGG ACGATCCGCG ACAACATCAC GAACTTCGCA
CCCGCGCCGC GGATCGGCGC GATGTTCGAC GCGGCGAAGC TCGCATGCAT CCACGACGAG
ATCGAGCGGC TCGACCATCG CTACGACACG CCGCTCGGCG ATACGCAGAA ATTCCTGTCG
GCCGGCCAGA TGCAGCGGCT GCTGATCGCG CGGGCGCTGT ACTGCGAGCC GCGCCTGCTG
ATTCTCGACG AATTTTCGTC GAACCTCGAC CAGGCGACGA CGCACGAGAT CTGCCGCAAC
GTGCTGACGC TGCCGTGCAC GATCGTGCTC GTCACGCATG ACGCGTCGAT CCTGTCGATG
GTCGACCGGA TCTACGAGAT GCAGGACGGC GTATTGACCG ATGCGACCGG CGCATGGCGT
TCGGCCGAGG AGACGCGGTG A
 
Protein sequence
MLFNTRKVRP VLQDEVTECG LACLAMIASW HGRETTLRTL RNRYPVRIDS GLSFFDLMEI 
SNDLGLRARG LQFDAGELDA LKTPCILHWG MNHYVVLTKV GYGSVHIVDP ALGETKLPLA
QALTHITGYA LELNPDIGFT RAGQADRIRL RDYLEGLTGI RKSLAIGIAG GVAAQLLLLL
GPSYVQLTID EALKKTDVDI LYLLTILFAI VFLFDTLYAN LVGNIKSYLR NIVSQQLSAN
MVGHLARLPI GYFLFHNTGD SISRVSSVSE VGRFLVDGLV GGLLNIVTCT LTLVLMLYYS
PVLAGISLAG MVLFALSRLA IQPQLQDAMS QILTRGAEAD ALLIENIRSA HSIKLLSAET
ARSSLWVNAF TQKLQAMRQQ ERLQLLFDAI SKGIVHVEQL VIVTYGAWLV MHGQSTIGVI
YAFIQYKNLF ADKFIDSIQL YVRRKVLQVH MDRVADVLQT ETEEPAPDAV VRPVDGFDGA
LSIRALSYTP KGGNRPILRD IALDVPAGSK IAIVGRTGSG KTTLLNLICG LVRPEPGTLF
VGGVDLVEVN LRQYRKHLAA VTQSDQLFRG TIRDNITNFA PAPRIGAMFD AAKLACIHDE
IERLDHRYDT PLGDTQKFLS AGQMQRLLIA RALYCEPRLL ILDEFSSNLD QATTHEICRN
VLTLPCTIVL VTHDASILSM VDRIYEMQDG VLTDATGAWR SAEETR