| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1746 |
|---|
| Symbol | |
|---|
| ID | 3753511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 1984135 |
|---|
| End bp | 1985289 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637766595 |
|---|
| Product | ABC efflux pump, inner membrane subunit |
|---|
| Protein accession | YP_372504 |
|---|
| Protein GI | 78062596 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0249268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCGT GGGCGCGCCT GCGCGATTCG TTTTCCGTCG CACGCTGGTG GAGCATCGTG
CTGAAGGAAT TCCTGCAGTT GCGACGCGAC CGCGTGACGT TCGCGATGAT CGTCGGCGTA
CCGATCATCC AGCTCACGCT GTTCGGCTTC GCGATCAACA CCGATCCGAA GCACCTGCCC
ACCGCGGTGA TCGTCGCCGA TGCGAGCCCG TTCGCGCGCA GCTTCGTCGC CGCGATGCGC
AATTCCGCGT ACTTCGACAT CGTCGAGACG CTGCCCGACG AAGCGGCCGG CCGGCATGCG
CTCGCCCGCG GCGACGTGCA GTTCGTGCTG ACCGTGCCGG CCGATTTCTC GCGGCGGCTG
CTGCGCGGCG AGCGTCCGTC GCTGCTCGTC GAGGCGGACG CGACCGATCC CGTCGCGACC
GCATCGGCGA TCGGCGCGCT GCCGGGCCTC GTGCAGCCCG TCGCGGACAA GGACCTGACG
GGCCCGCTCG CCTACCTGAA CGGCCGCCCG GCCGCGTTCG ACGTCGTGCT GCACCGGCTG
TACAACCCCG AGGGCATCAC GCAGTACAAC GTCGTGCCGG GCCTGATGGG CGTGATCCTG
ACGATGACGA TGGTGATGAT GACGGGCCTC GCGATCACGC GCGAACGCGA GCGCGGCACG
ATGGAGAACC TGCTCGCGAC GCCGGTGCGG CCGCTCGAGG TGATGACGGG CAAGATCGTC
CCGTACGTGC TGATCGGGCT GATCCAGGTA TCGATCATCG TCGTCGCGGC GCGGTTCGTG
TTCGACGTGC CGTTCATCGG CGGCGTGTTC GCGATCTACC TGTCCGCGCT GCTGTTCATC
GCCGCGAACC TGACGGTCGG CATCACGCTG TCGTCGCTCG CGCAGAACCA GTTGCAGGCG
ATGCAGCTCG CGGTGTTCTA CTTCCTGCCG AACATCCTGC TGTCGGGCTT CATGTTCCCG
TTCGCCGGGA TGCCGAAGTG GGCGCAGTTC ATCGGCAACC TGCTGCCGCT CACCTACTTC
AACCGCCTCG TGCGCGGCAT CCTGCTGAAA GGCAACGGCT GGAGCGACCT GTGGCCATCC
GTGTGGCCAG TCGCGCTGTT CACCGTTGTC GTGATGGGCG TCGCGCTGCG CTTCTACCGG
CGCACGCTCG ACTAG
|
|---|
| Protein sequence | MNAWARLRDS FSVARWWSIV LKEFLQLRRD RVTFAMIVGV PIIQLTLFGF AINTDPKHLP
TAVIVADASP FARSFVAAMR NSAYFDIVET LPDEAAGRHA LARGDVQFVL TVPADFSRRL
LRGERPSLLV EADATDPVAT ASAIGALPGL VQPVADKDLT GPLAYLNGRP AAFDVVLHRL
YNPEGITQYN VVPGLMGVIL TMTMVMMTGL AITRERERGT MENLLATPVR PLEVMTGKIV
PYVLIGLIQV SIIVVAARFV FDVPFIGGVF AIYLSALLFI AANLTVGITL SSLAQNQLQA
MQLAVFYFLP NILLSGFMFP FAGMPKWAQF IGNLLPLTYF NRLVRGILLK GNGWSDLWPS
VWPVALFTVV VMGVALRFYR RTLD
|
|---|
| |