Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B1646 |
Symbol | |
ID | 3753411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | - |
Start bp | 1872898 |
End bp | 1874280 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637766495 |
Product | amino acid transporter |
Protein accession | YP_372404 |
Protein GI | 78062496 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.815643 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.134679 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATCAAC CAGAAGACCA ATTGCACCGT GGGCTGGAAG AGCGGCACAT CAACCTGATG GCGCTCGGCG CGACGATCGG CGTCGGCCTG TTCCTCGGCT CGGCCTCCGC GATTCGCGTC GCCGGCCCGG CCATCCTGCT GACCTACCTG CTGGGCGGCA TCGCGATTTT CCTGATCATG CGCGCCCTCG GCGAAATGGC GATCGCCAAT CCGGTCGCCG GCGCGTTCAG CCGCTACGCA CGCGACTACC TCGGGCCGCT CGCCGGCTAC CTGACCGGCT GGACCTACTG GTTCGTGTGG ATCGTCACCT GCATGGCGGA AATCACGGCG GTCGGCGTCT ACATGCACAT GTGGTTCCCC GGCGTGCCGA ACTGGATCTG GGCGCTTGCG GCGCTCATGG CGATGGGCTC CGTGAACTTC ATCGCGGTCA AGCTGTACGG CGAATTCGAG TTCTGGTTCG CGCTGATCAA GATCGTCACG ATCGTGCTGA TGATCATCGG CGGCGGGTTG ATGATCGCGT TCGGCATCGG CAACGGCGGT GTCGCGATCG GCCTGTCGAA CCTGTGGGCG CACGGCGGCT TTATGCCGAA CGGCATCAAC GGCGTGATCG CCGCGTTGCC GATCGTGATG TTCGCGTATC TCGGCGTCGA GATGCTCGGC CTCACCGCCG GCGAGGCGCG CAATCCGGAG AAGTCGCTGA CGAAGGCCGT GAACTCGGTG TTCTGGCGCG TGCTGATTTT CTACATCGGC GCGCTGTTCG TGATCATGTC GCTGTATCCG TGGGACCAGA TCGGCACGCA GGGCAGCCCG TTCGTGATGA CGTTCTCGCG GCTCGGCATC CCGGCCGCCG CCGGCATCAT CAACTTCGTC GTGCTGACCG CGGCGCTGTC GTCGTGCAAC AGCGGCCTGT TCAGCACCGC GCGGATGCTC TACAACCTCG CGCAGCAGGG CCAGGCACCG AGCAAGCTTG GCAAGGTCAA TCGCAACGGC GTGCCGGTGT ACGGCGTGAT CGTGTCGGTC GCGCTGCTGC TGATCGGCGT GCTGCTCAAC TATCTCGCGC CGCAGCACGT GTTCACGTGG CTCACGTCGG TGTCGACGTT CGGTGCGATC TGGACGTGGT GCGTGATCCT GATCGCGCAG ATGCGCTTTC GCCGCACGCT GTCGGCCGAC AAGATCGCGC GCCTGCCGAT CCGCGTGCCG TTCTATCCGC TCGGCTCGTT CGTCGCGCTC GGTTTTCTCG TGCTGGTCGT CGTGCTGATG GCGTTCACGC CCGACACGCG CGTCGCGCTC GTGATCGGGC CGGTATGGAT CGTGCTGCTC GGCATCACGT ATGCGCTGTT CTACGCGAAC CGTCCGGCGG CATCGGTGCC GACGAAATCG TAA
|
Protein sequence | MNQPEDQLHR GLEERHINLM ALGATIGVGL FLGSASAIRV AGPAILLTYL LGGIAIFLIM RALGEMAIAN PVAGAFSRYA RDYLGPLAGY LTGWTYWFVW IVTCMAEITA VGVYMHMWFP GVPNWIWALA ALMAMGSVNF IAVKLYGEFE FWFALIKIVT IVLMIIGGGL MIAFGIGNGG VAIGLSNLWA HGGFMPNGIN GVIAALPIVM FAYLGVEMLG LTAGEARNPE KSLTKAVNSV FWRVLIFYIG ALFVIMSLYP WDQIGTQGSP FVMTFSRLGI PAAAGIINFV VLTAALSSCN SGLFSTARML YNLAQQGQAP SKLGKVNRNG VPVYGVIVSV ALLLIGVLLN YLAPQHVFTW LTSVSTFGAI WTWCVILIAQ MRFRRTLSAD KIARLPIRVP FYPLGSFVAL GFLVLVVVLM AFTPDTRVAL VIGPVWIVLL GITYALFYAN RPAASVPTKS
|
| |