| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1640 |
|---|
| Symbol | |
|---|
| ID | 3753405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 1864299 |
|---|
| End bp | 1866317 |
|---|
| Gene Length | 2019 bp |
|---|
| Protein Length | 672 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637766489 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_372398 |
|---|
| Protein GI | 78062490 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.934605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.169753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGACCC TGACCCGAGA GCTGTTACGG CAGGGTGCAT GGATCGTGCT GGCCGTCGGG
CTGGCGTCCG CGCTGCAGGC GTGGGCGGTT CGCGTCGTCG GCGAGCACAC GCCATTTGCG
CCGCTGCCTT TTTATGCAGG CGTGGCGGCA GCCGCATGGC TGACGTCGTT CGGCGGTGGC
CTGGCTGCGG CCGCCGTGAG CGTGGCCGTG ATCGGCACGC TGTGGTGGCG CGATGCGCCG
CTGGCGACGC TGCTCGCGCA GGCGGGCGCA TTCGTCGCGA TCAGCTTCGT CGAGTGTGTG
CTCGTGATGG CTGTGAAGCC GCTGCTTGCG AACGATCGCC TGCGCGATCC CGATCCCGAT
CCCGATGACG ACGGCGACGC CGATGCCGAT GCCCGCGAGC CGCATCGCGA GCCCGAGCCC
GTGCCCGCCA CCGCGCGCGA GCCCGTGCCT GACGACAGCC TGTTGCGCCA CGTGGTCGAC
GCGTCACCGG ACGCGATCGT CGGTGTCGAT GCCGCACGCC GGATCACGAG CTGGAATCCG
GCCGCGCGGA GGATCTTCGG CATCGACGCG GCGCAGGCCG CCGGGCGCGA CGTCGCCGCG
ATGATCGCGC CGCGCTGGTT GCGGCACCAT CCGTTGCCCG CGTCGTTCGC GAACCTGCAC
GCGTCGGTCG GTCCGCTCGA CGTATTGTGC GTGCGACGCG ACGGCGGCCG TTTTCGTGCG
ACCTTCGCCG CCGCGCCGAT GGTCGATACG CAGGGCAACT GCACGGGCCT GTCGATGACG
CTGCGCGATG CGCACGAACG CCGTCGCGGC GAGCGGCGCA ACCTGCGTTC GCTGCGCGGC
GCCCGCGACG CGCGTGCACA GGCTGACACG TCGAACCGGC TGAAGGACGA ACTGCTGGCC
ACGGTGTCGC ACGAACTGCG TACGCCGCTG AACGTGATCT ACGGCTGGGT CGAGGTGCTG
CGCAACGTCG ACGGTCAGGG GCTCGCGCAA CAGGCGGTCG ACGCGATCGA TCGCAGCGCG
CGGTCGCTGT CGCACATGGT GGCCGACCTG CTCGACGCGT CGTCGCTCGC GACCGGCCGG
TTGCGCCTCG AGCGCGTGCC GGTCGATCTC GTGCGGGTCG TGCGCGATAC CACCCGCGAA
CTCGACGCGA CGGCACAGGC GAGCGGGCTC GAGCTGTCGA CCCACTACGC GATGCCCACC
TGCGTGATTC CGGCGGACCG CGAGCGCGTG CGCCAGGTCC TGTCGAACCT GTTGTCGAAT
GCGATCAAGT TCACGCCGCC GGGCGGCCGC ATCGTGGTGT CGCTGGCCCG GGCAGGCGAG
CGCGTGCGGC TGTCGGTCGC CGATACCGGG CAGGGCATTG CGCCGGAATA CCTGCCGCAC
CTGTTCGAGA CGTTCAGCCG GCCCGAACGC GCATTCGCGT CGCCGAAGCG CGGCCTCGGG
CTCGGCCTGT CGATCGTGCG CAACATCGCC CAACTGCATG GCGGCGACGT CGTCGCGACG
AGCGCCGGCC CCGGACGCGG GACGACCGTC ACGGTCACGC TGCCGGCCGG CTGGGACGTC
GACGATCCGG TCGAAAACCT GCTGCACGCG GCGGGCGCAC CGGAGACAGC GACGCTCGAC
GGCCAGCGCG TGCTCGTCGT CGACGATGAT GCGACCTCGC GCGCGAGCCT CGCCGCGGCA
CTCGAAACGA TGGGCGCGCA GGTGTCGACC GCGCAATCGG GGCACGACGC GCTCGACGTG
GTGGAACGGC AGGCGCCGAA CGTCGTGCTG TCGGATCTCG CGATGCCGGA CGGTGATGGC
TTCTGGCTGC TCGACCGCAT CCGCCATTTG CCGGGAGGCA GCGGGCATCT GCCCGTCGTC
GCGGTCACGG CCCACGCCGG TAACGCCGAC CGGCACCGCG TGATGGCGGC CGGCTTCGAC
GCATATCTGC GCAAGCCGGT GGACATGCCG ACGCTCGCAA GCGTGATCGC CGATGTCGCG
CCGGACGCCG CGCACGATCG GAAAGAGCGC GGCCGGTAG
|
|---|
| Protein sequence | MRTLTRELLR QGAWIVLAVG LASALQAWAV RVVGEHTPFA PLPFYAGVAA AAWLTSFGGG
LAAAAVSVAV IGTLWWRDAP LATLLAQAGA FVAISFVECV LVMAVKPLLA NDRLRDPDPD
PDDDGDADAD AREPHREPEP VPATAREPVP DDSLLRHVVD ASPDAIVGVD AARRITSWNP
AARRIFGIDA AQAAGRDVAA MIAPRWLRHH PLPASFANLH ASVGPLDVLC VRRDGGRFRA
TFAAAPMVDT QGNCTGLSMT LRDAHERRRG ERRNLRSLRG ARDARAQADT SNRLKDELLA
TVSHELRTPL NVIYGWVEVL RNVDGQGLAQ QAVDAIDRSA RSLSHMVADL LDASSLATGR
LRLERVPVDL VRVVRDTTRE LDATAQASGL ELSTHYAMPT CVIPADRERV RQVLSNLLSN
AIKFTPPGGR IVVSLARAGE RVRLSVADTG QGIAPEYLPH LFETFSRPER AFASPKRGLG
LGLSIVRNIA QLHGGDVVAT SAGPGRGTTV TVTLPAGWDV DDPVENLLHA AGAPETATLD
GQRVLVVDDD ATSRASLAAA LETMGAQVST AQSGHDALDV VERQAPNVVL SDLAMPDGDG
FWLLDRIRHL PGGSGHLPVV AVTAHAGNAD RHRVMAAGFD AYLRKPVDMP TLASVIADVA
PDAAHDRKER GR
|
|---|
| |