Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B1592 |
Symbol | |
ID | 3753357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | - |
Start bp | 1809587 |
End bp | 1813213 |
Gene Length | 3627 bp |
Protein Length | 1208 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637766441 |
Product | hypothetical protein |
Protein accession | YP_372350 |
Protein GI | 78062442 |
COG category | [S] Function unknown |
COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.727557 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.457538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGG CTGTCGCGCG TTTCGTCCGG CCGTTGCCGT CGCGGGAGAT CTGGACTTTC GCCGGTCTCG TCGTGCTCGC GTGCTTCGTG TGGCTCGCAG GCCCGCTGTT CGCGTTCGCC GAGGTCCGGC CGCTCGAAAG CGGCTGGGCG CGCGGGCTCA CGATCGCGGT GCTGTTCATC GCGTGGGGCG CGCGTGTCGC ATGGCGCAGC TGGCGCGCGG GCCGCCTCAA CGCGCAGTTG CTGAACCAGC TGCGCGAGGC CGCTCCCGGG CCGGCCACCG CCGACGATCC GGCAAAGGCG CAGCTCGACG AGTTGCGCAG CCGCTTCGAC GAGGCCGCTT CGCTGCTGAA GAAGGTGCGC TTCGGACAGG CCGACACCGT GCGCAAGGGC CTGCCGCGCT GGTTCGACCG GATGTCGCGC CAGTATCTGT ATCAGCTGCC TTGGTACGTG TTCATCGGCG CGCCGGGCTC GGGCAAGACC ACCGCGCTCG TGAATTCCGG GCTCAGCTTT CCGCTCGCGG AGCAGTTCGG CCGCGCGGCG ATTCGCGGCG TGGGCGGCAC GCGGCATTGC GACTGGTGGT TCACGAACGA CGCGGTGCTG ATCGACACCG CCGGCCGTTA CACGACGCAC GAGGGCAATC GCGCGCTCGA CGAGGCCGAG TGGAAAGGCT TCGTCGACCT GCTGAAGAAA TACCGCACGC GCCAGCCGCT GAACGGCGCG ATGCTGACGA TCAGCGTCGC CGACCTGCTC GGCGCGTCGG AGGCCGAACG CACGCAGCAC GCGATGGTGC TGCGCAAGCG GCTGCTCGAA CTGCGCGCGC AGCTCGGCAT TCGCTTTCCC GTGTACCTGC TCGTGACGAA GGCCGACCTG CTGGCGGGCT TCGCCGAGTA TTTCAGCAGC TACGGCCGCA CCGAATGCGC GCAGGTGTGG GGCTTTACGT TCCCGCTCGC GCAGAGCGAG GCGCCGGGTT TCGACCTGCG CGCGGCGTTC GACCGTGAAT ACCGGCTGCT GCACCAGCGG CTGAACGACG GACTGCCCGA ACTGCTCGCC GCGCAGACCG ACGCGCGCCA GCGCGAAATG ACGTACCTGC TGCCGCAGCA GATCGCCGAC CTGCAGGACA TGCTCGGCCA GTTCGTCGCC GAGGTGTTTT CGGTGTCGAG CTACGAGCCG ATGCCGATGC TGCGCGGCGT CTACCTGACG AGCGGCACGC AGGAGGGCAC CGCGTTCGAT CGCGTGATGA GCGGCATCAA GCGTTTCCTG AAGATCGAGG GCGTGCCGCC GGTCGCGCAG GTCGGCTCGA CCGGGCGCAG CTTCTTCCTG AAGTCGCTGC TGCAGGAACA CATCTTCCGC GAAGCCGCGC TCGCCGGCAG CGACCTGCGC TGGCATCAGA AGCGGCGCGT GCTACAGATC GTCGGCTACG TGCTGCTCGC GCTGGTGTGC GTGGCCGTGC TGGTCGCGTG GCTGCGCAGC TATTCGAACA ATCGCGCGTA TCTCGACCAG ATCGCCGCGC GCGTGCCGGC CGTCGATGCG CAGATCGCCG GCGCGAAATT CTCCGATGCG GCCGACGTCG CCCGCCTGTT GCCCGTGCTC GACGCGCTCG GCAACCTCGC GAATGCGGGC GGCGTCGACC TGCAGCATCC GCCGCTTGCG TATCGGTGGG GGCTGTTCCA GGGCGAGAAG ATCGACGAAG CCGTCGACGC CGTGTACCGG CGCGCGCTCG AAGACGTGCT GCTGCCGATC GCCGCGCGCC GGATGGAGGC CGCGCTGCGC GACGCACGGC CCGACGAGAC CGAATACGCG TATGCGGCGC TGAAGGCGTA CCTGATGCTG TACGACAGCG CGCACTACGA TCCCGCGTTC GTGCAGGCCG TCGTCGATCT CGAAATGGAA CGCGCGCTGC CGCCCGATTT CTCGCCGGCC GAACGCACCG CGCTGCGTGC GCATCTCGCC GCGCTGTTCG GCAACCGTGT CGCGGTGTCG CCGTATCCGA TGAACGAGCG GCTCGTGGCC GACGTGCGCG ACCGCTTGCG GCAGGTGCCG TTCTCGCAGC GGCTGTACCG GCAGCTCACG CTCACGCTGC GGCCGGCCAC GTCCGCGTTC GACTTCAGCG TCGCGCGGGC GGTCGGCCCC GATGCTTCAC TGGTGTTCCG CCGCCAGAGC GGCAAGCCGC TGTCGGAAGG CGTGCCGGGG CTCTATACGC GCAACGGCTA TCGCAATGTG TTCGCGCCGC GCCTGGCCGG CGAGGTCGAC ACCTACGGGC GCGAGGAAGT GTGGGTGCTG AACCTCGGGT TGTCCGAGAT TCCGGGCCCG AACGACGCTG CCGCGTGGGC GCGCGATATC CGCCAGCTCT ACCTGAACGA CTACCTGAAG ATCTGGGACG ACTATCTCGC CGACATCAAG CTGCAGCGCA CGGCGACGCT CGCGCAGAGC ATCCAGGTGG CGCGCGCGCT GTCGTCCGCC GATTCGCCGC TCACGCGGCT GATGGTCGCG CTCGCACGCG ATACCGCGCT CGGCGATGCA CCGGGCGGGG CGCGCAATCT CGCCGCGCGC GCGCAGGACA AGGTCGACGA GGCGCGCAGC TCGCTGTCGC AGATCTTCGC GGGCCAGGGC AGCGATTCGA GCGCGTCCGC GGCGGCGCCC GCGAGCGCCG AGCAGATCGT CGACAGCCAC TTCGCCGGGC TGCGCGCGTT CGCGCCGGGC AGCGGCGACC AGGCCCAGGC GTTCAGCGAG GTGCTGAAGT CGATCGACGC GCTGTACACG TACCTGACGG CCACCGACGA CGCCTTGAGA AGCGGCGCGC AACCGCCGCC GTCCGACGCG CCAGCCAGGC TGCGCGCACA GGCCGGCCGC CTGCCGACAC CATTCCGCGA AGTGCTCGAC GACCTGTCTA ACGTCGCGAA CGGCAGCGTC GCGACTGTCG AGCAGCGCAG CGTCGCGACG CGGGCCGGTG CGAACGTCGG TGACTTCTGC CGGCAGGCGA TCGCGGGCCG CTATCCGTTC GCGCGTGGCT CGTCACGCGA CGTCGCGCCG GCGGATTTCG CGCAGATGTT CGCGCCCGGC GGCCTGATGG ACGACTTCTT CCAGAAGAAC CTGCAGTCGA TCGTCGATAC GACGTCGCAC CCGTGGCGCT TCGCGAACCG CAATGCGGAC GCCGATCCGT CGGCCGCCGC GATGCTTGCT TCGTTCGAGA AGGCGGCGGT GATCCGCGAC GCCTATTTCG GCGGCGGCGC ACGCACCGCG CAGTTGAAGG TACAGATCCA GCCGCTCGAA ATGGACCCGT CGATCACGGA GATGGTGCTC GACGTCGACG GGCAGATCGT CCGCTACGCG CACGGCCCGC TCGTGCAGAG TGCGGTGGAC TGGCCGGGCC CGCGCGGCAG CAACCAGGTG CGGCTGCAGG TGTCCGGGCA GGCCGGCGCG ACCGACGGCT TCTCGACCGA CGGGCCGTGG GCGCTGCACC GGTTGTTCGA CCGCGCGGCC GTGTCGGCCG GACGCGGCTC GGACCAGATG ATTGCGCGGT TCACGGTCGA CGGCAAACCG ATCGTGCTGC AAGTGAATGC GGGCAGTGTC CGCAACCCGT TCAGGCTGCC CCAGATGGAG TCCTTTACAT GCCCTCCGAA GCCATGA
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Protein sequence | MNQAVARFVR PLPSREIWTF AGLVVLACFV WLAGPLFAFA EVRPLESGWA RGLTIAVLFI AWGARVAWRS WRAGRLNAQL LNQLREAAPG PATADDPAKA QLDELRSRFD EAASLLKKVR FGQADTVRKG LPRWFDRMSR QYLYQLPWYV FIGAPGSGKT TALVNSGLSF PLAEQFGRAA IRGVGGTRHC DWWFTNDAVL IDTAGRYTTH EGNRALDEAE WKGFVDLLKK YRTRQPLNGA MLTISVADLL GASEAERTQH AMVLRKRLLE LRAQLGIRFP VYLLVTKADL LAGFAEYFSS YGRTECAQVW GFTFPLAQSE APGFDLRAAF DREYRLLHQR LNDGLPELLA AQTDARQREM TYLLPQQIAD LQDMLGQFVA EVFSVSSYEP MPMLRGVYLT SGTQEGTAFD RVMSGIKRFL KIEGVPPVAQ VGSTGRSFFL KSLLQEHIFR EAALAGSDLR WHQKRRVLQI VGYVLLALVC VAVLVAWLRS YSNNRAYLDQ IAARVPAVDA QIAGAKFSDA ADVARLLPVL DALGNLANAG GVDLQHPPLA YRWGLFQGEK IDEAVDAVYR RALEDVLLPI AARRMEAALR DARPDETEYA YAALKAYLML YDSAHYDPAF VQAVVDLEME RALPPDFSPA ERTALRAHLA ALFGNRVAVS PYPMNERLVA DVRDRLRQVP FSQRLYRQLT LTLRPATSAF DFSVARAVGP DASLVFRRQS GKPLSEGVPG LYTRNGYRNV FAPRLAGEVD TYGREEVWVL NLGLSEIPGP NDAAAWARDI RQLYLNDYLK IWDDYLADIK LQRTATLAQS IQVARALSSA DSPLTRLMVA LARDTALGDA PGGARNLAAR AQDKVDEARS SLSQIFAGQG SDSSASAAAP ASAEQIVDSH FAGLRAFAPG SGDQAQAFSE VLKSIDALYT YLTATDDALR SGAQPPPSDA PARLRAQAGR LPTPFREVLD DLSNVANGSV ATVEQRSVAT RAGANVGDFC RQAIAGRYPF ARGSSRDVAP ADFAQMFAPG GLMDDFFQKN LQSIVDTTSH PWRFANRNAD ADPSAAAMLA SFEKAAVIRD AYFGGGARTA QLKVQIQPLE MDPSITEMVL DVDGQIVRYA HGPLVQSAVD WPGPRGSNQV RLQVSGQAGA TDGFSTDGPW ALHRLFDRAA VSAGRGSDQM IARFTVDGKP IVLQVNAGSV RNPFRLPQME SFTCPPKP
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