Gene Bcep18194_B1592 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1592 
Symbol 
ID3753357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp1809587 
End bp1813213 
Gene Length3627 bp 
Protein Length1208 aa 
Translation table11 
GC content69% 
IMG OID637766441 
Producthypothetical protein 
Protein accessionYP_372350 
Protein GI78062442 
COG category[S] Function unknown 
COG ID[COG3523] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03348] type VI secretion protein IcmF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.727557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.457538 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG CTGTCGCGCG TTTCGTCCGG CCGTTGCCGT CGCGGGAGAT CTGGACTTTC 
GCCGGTCTCG TCGTGCTCGC GTGCTTCGTG TGGCTCGCAG GCCCGCTGTT CGCGTTCGCC
GAGGTCCGGC CGCTCGAAAG CGGCTGGGCG CGCGGGCTCA CGATCGCGGT GCTGTTCATC
GCGTGGGGCG CGCGTGTCGC ATGGCGCAGC TGGCGCGCGG GCCGCCTCAA CGCGCAGTTG
CTGAACCAGC TGCGCGAGGC CGCTCCCGGG CCGGCCACCG CCGACGATCC GGCAAAGGCG
CAGCTCGACG AGTTGCGCAG CCGCTTCGAC GAGGCCGCTT CGCTGCTGAA GAAGGTGCGC
TTCGGACAGG CCGACACCGT GCGCAAGGGC CTGCCGCGCT GGTTCGACCG GATGTCGCGC
CAGTATCTGT ATCAGCTGCC TTGGTACGTG TTCATCGGCG CGCCGGGCTC GGGCAAGACC
ACCGCGCTCG TGAATTCCGG GCTCAGCTTT CCGCTCGCGG AGCAGTTCGG CCGCGCGGCG
ATTCGCGGCG TGGGCGGCAC GCGGCATTGC GACTGGTGGT TCACGAACGA CGCGGTGCTG
ATCGACACCG CCGGCCGTTA CACGACGCAC GAGGGCAATC GCGCGCTCGA CGAGGCCGAG
TGGAAAGGCT TCGTCGACCT GCTGAAGAAA TACCGCACGC GCCAGCCGCT GAACGGCGCG
ATGCTGACGA TCAGCGTCGC CGACCTGCTC GGCGCGTCGG AGGCCGAACG CACGCAGCAC
GCGATGGTGC TGCGCAAGCG GCTGCTCGAA CTGCGCGCGC AGCTCGGCAT TCGCTTTCCC
GTGTACCTGC TCGTGACGAA GGCCGACCTG CTGGCGGGCT TCGCCGAGTA TTTCAGCAGC
TACGGCCGCA CCGAATGCGC GCAGGTGTGG GGCTTTACGT TCCCGCTCGC GCAGAGCGAG
GCGCCGGGTT TCGACCTGCG CGCGGCGTTC GACCGTGAAT ACCGGCTGCT GCACCAGCGG
CTGAACGACG GACTGCCCGA ACTGCTCGCC GCGCAGACCG ACGCGCGCCA GCGCGAAATG
ACGTACCTGC TGCCGCAGCA GATCGCCGAC CTGCAGGACA TGCTCGGCCA GTTCGTCGCC
GAGGTGTTTT CGGTGTCGAG CTACGAGCCG ATGCCGATGC TGCGCGGCGT CTACCTGACG
AGCGGCACGC AGGAGGGCAC CGCGTTCGAT CGCGTGATGA GCGGCATCAA GCGTTTCCTG
AAGATCGAGG GCGTGCCGCC GGTCGCGCAG GTCGGCTCGA CCGGGCGCAG CTTCTTCCTG
AAGTCGCTGC TGCAGGAACA CATCTTCCGC GAAGCCGCGC TCGCCGGCAG CGACCTGCGC
TGGCATCAGA AGCGGCGCGT GCTACAGATC GTCGGCTACG TGCTGCTCGC GCTGGTGTGC
GTGGCCGTGC TGGTCGCGTG GCTGCGCAGC TATTCGAACA ATCGCGCGTA TCTCGACCAG
ATCGCCGCGC GCGTGCCGGC CGTCGATGCG CAGATCGCCG GCGCGAAATT CTCCGATGCG
GCCGACGTCG CCCGCCTGTT GCCCGTGCTC GACGCGCTCG GCAACCTCGC GAATGCGGGC
GGCGTCGACC TGCAGCATCC GCCGCTTGCG TATCGGTGGG GGCTGTTCCA GGGCGAGAAG
ATCGACGAAG CCGTCGACGC CGTGTACCGG CGCGCGCTCG AAGACGTGCT GCTGCCGATC
GCCGCGCGCC GGATGGAGGC CGCGCTGCGC GACGCACGGC CCGACGAGAC CGAATACGCG
TATGCGGCGC TGAAGGCGTA CCTGATGCTG TACGACAGCG CGCACTACGA TCCCGCGTTC
GTGCAGGCCG TCGTCGATCT CGAAATGGAA CGCGCGCTGC CGCCCGATTT CTCGCCGGCC
GAACGCACCG CGCTGCGTGC GCATCTCGCC GCGCTGTTCG GCAACCGTGT CGCGGTGTCG
CCGTATCCGA TGAACGAGCG GCTCGTGGCC GACGTGCGCG ACCGCTTGCG GCAGGTGCCG
TTCTCGCAGC GGCTGTACCG GCAGCTCACG CTCACGCTGC GGCCGGCCAC GTCCGCGTTC
GACTTCAGCG TCGCGCGGGC GGTCGGCCCC GATGCTTCAC TGGTGTTCCG CCGCCAGAGC
GGCAAGCCGC TGTCGGAAGG CGTGCCGGGG CTCTATACGC GCAACGGCTA TCGCAATGTG
TTCGCGCCGC GCCTGGCCGG CGAGGTCGAC ACCTACGGGC GCGAGGAAGT GTGGGTGCTG
AACCTCGGGT TGTCCGAGAT TCCGGGCCCG AACGACGCTG CCGCGTGGGC GCGCGATATC
CGCCAGCTCT ACCTGAACGA CTACCTGAAG ATCTGGGACG ACTATCTCGC CGACATCAAG
CTGCAGCGCA CGGCGACGCT CGCGCAGAGC ATCCAGGTGG CGCGCGCGCT GTCGTCCGCC
GATTCGCCGC TCACGCGGCT GATGGTCGCG CTCGCACGCG ATACCGCGCT CGGCGATGCA
CCGGGCGGGG CGCGCAATCT CGCCGCGCGC GCGCAGGACA AGGTCGACGA GGCGCGCAGC
TCGCTGTCGC AGATCTTCGC GGGCCAGGGC AGCGATTCGA GCGCGTCCGC GGCGGCGCCC
GCGAGCGCCG AGCAGATCGT CGACAGCCAC TTCGCCGGGC TGCGCGCGTT CGCGCCGGGC
AGCGGCGACC AGGCCCAGGC GTTCAGCGAG GTGCTGAAGT CGATCGACGC GCTGTACACG
TACCTGACGG CCACCGACGA CGCCTTGAGA AGCGGCGCGC AACCGCCGCC GTCCGACGCG
CCAGCCAGGC TGCGCGCACA GGCCGGCCGC CTGCCGACAC CATTCCGCGA AGTGCTCGAC
GACCTGTCTA ACGTCGCGAA CGGCAGCGTC GCGACTGTCG AGCAGCGCAG CGTCGCGACG
CGGGCCGGTG CGAACGTCGG TGACTTCTGC CGGCAGGCGA TCGCGGGCCG CTATCCGTTC
GCGCGTGGCT CGTCACGCGA CGTCGCGCCG GCGGATTTCG CGCAGATGTT CGCGCCCGGC
GGCCTGATGG ACGACTTCTT CCAGAAGAAC CTGCAGTCGA TCGTCGATAC GACGTCGCAC
CCGTGGCGCT TCGCGAACCG CAATGCGGAC GCCGATCCGT CGGCCGCCGC GATGCTTGCT
TCGTTCGAGA AGGCGGCGGT GATCCGCGAC GCCTATTTCG GCGGCGGCGC ACGCACCGCG
CAGTTGAAGG TACAGATCCA GCCGCTCGAA ATGGACCCGT CGATCACGGA GATGGTGCTC
GACGTCGACG GGCAGATCGT CCGCTACGCG CACGGCCCGC TCGTGCAGAG TGCGGTGGAC
TGGCCGGGCC CGCGCGGCAG CAACCAGGTG CGGCTGCAGG TGTCCGGGCA GGCCGGCGCG
ACCGACGGCT TCTCGACCGA CGGGCCGTGG GCGCTGCACC GGTTGTTCGA CCGCGCGGCC
GTGTCGGCCG GACGCGGCTC GGACCAGATG ATTGCGCGGT TCACGGTCGA CGGCAAACCG
ATCGTGCTGC AAGTGAATGC GGGCAGTGTC CGCAACCCGT TCAGGCTGCC CCAGATGGAG
TCCTTTACAT GCCCTCCGAA GCCATGA
 
Protein sequence
MNQAVARFVR PLPSREIWTF AGLVVLACFV WLAGPLFAFA EVRPLESGWA RGLTIAVLFI 
AWGARVAWRS WRAGRLNAQL LNQLREAAPG PATADDPAKA QLDELRSRFD EAASLLKKVR
FGQADTVRKG LPRWFDRMSR QYLYQLPWYV FIGAPGSGKT TALVNSGLSF PLAEQFGRAA
IRGVGGTRHC DWWFTNDAVL IDTAGRYTTH EGNRALDEAE WKGFVDLLKK YRTRQPLNGA
MLTISVADLL GASEAERTQH AMVLRKRLLE LRAQLGIRFP VYLLVTKADL LAGFAEYFSS
YGRTECAQVW GFTFPLAQSE APGFDLRAAF DREYRLLHQR LNDGLPELLA AQTDARQREM
TYLLPQQIAD LQDMLGQFVA EVFSVSSYEP MPMLRGVYLT SGTQEGTAFD RVMSGIKRFL
KIEGVPPVAQ VGSTGRSFFL KSLLQEHIFR EAALAGSDLR WHQKRRVLQI VGYVLLALVC
VAVLVAWLRS YSNNRAYLDQ IAARVPAVDA QIAGAKFSDA ADVARLLPVL DALGNLANAG
GVDLQHPPLA YRWGLFQGEK IDEAVDAVYR RALEDVLLPI AARRMEAALR DARPDETEYA
YAALKAYLML YDSAHYDPAF VQAVVDLEME RALPPDFSPA ERTALRAHLA ALFGNRVAVS
PYPMNERLVA DVRDRLRQVP FSQRLYRQLT LTLRPATSAF DFSVARAVGP DASLVFRRQS
GKPLSEGVPG LYTRNGYRNV FAPRLAGEVD TYGREEVWVL NLGLSEIPGP NDAAAWARDI
RQLYLNDYLK IWDDYLADIK LQRTATLAQS IQVARALSSA DSPLTRLMVA LARDTALGDA
PGGARNLAAR AQDKVDEARS SLSQIFAGQG SDSSASAAAP ASAEQIVDSH FAGLRAFAPG
SGDQAQAFSE VLKSIDALYT YLTATDDALR SGAQPPPSDA PARLRAQAGR LPTPFREVLD
DLSNVANGSV ATVEQRSVAT RAGANVGDFC RQAIAGRYPF ARGSSRDVAP ADFAQMFAPG
GLMDDFFQKN LQSIVDTTSH PWRFANRNAD ADPSAAAMLA SFEKAAVIRD AYFGGGARTA
QLKVQIQPLE MDPSITEMVL DVDGQIVRYA HGPLVQSAVD WPGPRGSNQV RLQVSGQAGA
TDGFSTDGPW ALHRLFDRAA VSAGRGSDQM IARFTVDGKP IVLQVNAGSV RNPFRLPQME
SFTCPPKP