| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1583 |
|---|
| Symbol | |
|---|
| ID | 3753348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 1799185 |
|---|
| End bp | 1800288 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637766432 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_372341 |
|---|
| Protein GI | 78062433 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.314099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG ATATGTCACC GGGTACCGGG CCCGCCGCCG AAGCCGCACG CCGCGACGCG
TGGTGGGCAC GCCTGCGCGC CGCGCCGCAC GGTTACGACC TGTTCCAGGC GCTGCGCTGG
CTCGATGCGC TGTCGCCCGG CCGCGCGCCG CTCGGCCATG CCACGCGCCC GCGCGACGAG
CCGGTACGGC TCGGGCAGCA GCCGTCGCTC GCGTTCGCGG CGTCGATGCT GGCCGGCGTG
AGCGACGCGG GCAGCGGCGT GCCGCCGCGC ATCGCGATCC ACGGGTTCGG GCTGTTCGGC
CCGAACGGGC CGCTGCCGAC GCACCTGACC GAATACGCGC ACGAACGCGC GGCGCAGCAC
GACGACCCGA CGTTTGCCGC GTTCGCCGAC CTGTTCCATC ACCGGCTGAT CCTGCTGTTC
TACCGCGCAT GGGCCGACGC GCAGCCAACG GTGAGCCTCG ATCGCCCGGA GCGCGCACGG
TTCGACGGTT ATGTCGCGAG CCTGATCGGG CGGGCGGCAC ACGGCGACAA GCCCGTCGCG
AAAGCCGACA CCCATGCCAA CGCCGACACG CTCGCGCCGC ATGCGCGCTA CTTCCATGCG
GGCCATCTCG TGCGGCACAC GCGCAACCCG GAAGGGCTCG TGCAGATCCT GCGCCGGCAT
TTCGGCGTCG AGGCTCGCAT CGTCGAGCAT GTGCCGCAGT GGGTCGCGAT CGAACGTTCG
CAGCGCTGCA CGATCCGCGC GACGCGGCCG ACGTTGCGGG TCGGCGCCGT CGCGCTCGGC
ATCGCGGTGC GCGATGCCCA GTCGCGCTTC CGGATCGTGC TCGGCCCGCT GTCGCTCGAC
GCGTACCGCC GTTTCCTGCC GGGCGGCCCG CATGCCCGGC AGCTCGCGCA ATGGGTGCGC
GAATACGTCG GCATCGAGTT CGACTGGGAT GTCCAGCTCG AACTGGCGGC CGACGCGGTG
CCCGCGATCG CGCTCGGCGC GCCGCAGGGC ATCGGCCGCA CCGCGTGGCT CGGGCAGCGA
CTCGATCCGG GCCCCGCGCG TGACCTCGTC GTCCGCTACG ACGTGCGGCG CGGCGGCGCC
CCCCTTCATC GCGAAACTGC CTAA
|
|---|
| Protein sequence | MKRDMSPGTG PAAEAARRDA WWARLRAAPH GYDLFQALRW LDALSPGRAP LGHATRPRDE
PVRLGQQPSL AFAASMLAGV SDAGSGVPPR IAIHGFGLFG PNGPLPTHLT EYAHERAAQH
DDPTFAAFAD LFHHRLILLF YRAWADAQPT VSLDRPERAR FDGYVASLIG RAAHGDKPVA
KADTHANADT LAPHARYFHA GHLVRHTRNP EGLVQILRRH FGVEARIVEH VPQWVAIERS
QRCTIRATRP TLRVGAVALG IAVRDAQSRF RIVLGPLSLD AYRRFLPGGP HARQLAQWVR
EYVGIEFDWD VQLELAADAV PAIALGAPQG IGRTAWLGQR LDPGPARDLV VRYDVRRGGA
PLHRETA
|
|---|
| |