Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B1581 |
Symbol | |
ID | 3753346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | - |
Start bp | 1794239 |
End bp | 1796512 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637766430 |
Product | Rhs element Vgr protein |
Protein accession | YP_372339 |
Protein GI | 78062431 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.206829 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAATCGCG TATTCACACT CGACAGCCTG CACGGCGACG ACCTCAAGTT CCATACGCTC GACGGCAGCG ACGAACTCGG CCGCCTGTTC GAATTCCGGA TCGAGGCGCT CGCCGACAGT CACAGCCTGT CGCTGAAGGA CTTGCTCGGC AAGCCGGTGA CGGTCCGGAT CGAACAGCAG GACCTGTCGA CCCGCTACCT GAACGGTATC GTTGCGCGTG CGTCGCTTTC CGGCCGGCGC GCCGAGCGGT ATTACGGCTA CGAGCTGATC GTGCGCCCAT GGCTGTGGCT CGCGACGCGA CGCTCCGATT GCCGGATCTT CCAGAACAAG ACCGTGCCCG AGATCATGCA GGAAGTGCTG GCGACGTACG GCTTTCCGAT CGAGAACCAT CTCGCCGAGT CGTATGTGCC GCGCGACTAT TGCGTGCAGT ACAACGAGAC CGATGCCGCG TTCGTGTCGC GGCTGATGGA GTTCGAGGGG ATCTACTTCT GGTTCCGGCA TGCCGAGGAC ACGCATACGC TGATGCTCGG TGACGCGATG TCGTCGCACA CCGTGCTGCC CGGCTACGAG ACGATTCCGT ACATCGCGCG CGACCGGACG GCGATCGCCG ACGAGGAGCA TATCGACGGC TGGCTGCCCG CGCAGGAAGT GAGTGTCGGG CGGCACCAGA CCACCGACTA CGACTATACG AAGCCGCGCG CCGATCTTTC GTCGCAGAAG GTCGATCCGC GTGGTCACGA TCACGACAGT TTCGCGTCGT TCGAATGGCC GGGCGGCTAT CGCGACGATG CGCCCGGCGC ACACTACAGC CGCGTGCGGC TCGAGGAACA GCAGGCCGAG CACGAGCGGG CGAGTGCCGA TACCGATGTG CGTGGTGTCG CGCCCGGTTA TCTGTTCACG CTCGAACATT GCCCGCGCGC GGATCAGAAC CGTGAGTACC TGATCGTGCG ATGCCAGTAC CGCTTCCAGG AGAACGCGTA TGCGAGCGAC CAGGGCGCGG AGGCCGTCGT GCATCAGACG ATGATGCTCG TGCAGCCGTC GAGCCTGCCT TACCGGTCGC CGCGCGACAC GCCGCGGCCG CGGACCAACG GGCCGCAGAC GGCAACCGTG GTCGGGCCGC CCGGGGAGGA AATCTGGACC GACCAGTATG GGCGCGTGAA GCTGCAGTTC CGCTGGGATC GGTATGGGCA AAGCAATCAG GATTCGTCGT GCTGGGTGCG GGTGTCGAGT CCCTGGGCCG GGGGCGGGTT CGGGGGCGTG CAGATTCCGC GGGTAGGCGA TGAGGTGGTT GTCGATTTTC TGAATGGCGA TCCGGATGAG CCGATCGTCA CCGGGCGAGT TTTCAACGGC GAGAAGATGC CGCCGTGGGG GCTGCCGGGG AGTGCGACGC AGAGCGGGTT GCTGTCCAGA TCTTCACCGG GCGGAACGAC TGATCACGCC AACGCGTTCC GGTTCGAGGA CAAGAAGGGC GCCGAGCAAC TCTGGATGCA CGCGGAAAGG AATTTCGATG CGGAGACGGA GCTCGATCAT TCGCTTTCTG TCGGGAACAA CCATACGCAT ACGGTCGGGA ACGACGAAAC GATGCAGGTG AAGAACAACC GGCAACGGAG TGTGGGGCAG AACGAGACGG TGAATATCGG GCAGAACAGG GTGGCGCAGA TTGGGGCGAA TGAGACGCAT GGGGTGACGG GGAACCGCAG CGTATCGGTC GACGGCAACA GTTCGCATAC GGTGACCAAG GGGAATCACA ACCTGGCGGT GGTCGCCGGC ACGCATGACG TCTTCGTCGA GGGGAACAGC ACGCATGTCG TCGGTACCGG ATCGTATGCG ACGAAGGTCA ATACGGGAAA CCATTCCGTG GACGTCAACA AAGTCGCTTC ATTGGCGGCC GGCCAATACA TCGACATGGG TTCAGGAAAG AGTGGCGTGT CGATCAACAA GGACAACGTC GGCGTCTCCA TCGGCGGAAC CGGAGGCGAT ACCGGTGTCG GGATCAGCGG CCAGGGTGGC GGTGTGGCCA TCGCCGGATA CGGCAAGGGC GTCAACATTG CGGGCTACGC ACCTGGCGTG ACGATTTACG GCGAGAACGA TCTCAATCTT TCCGGCAAGT CGACGGCCAA TCTTCAGGCA CCGACGGTCA ACATCGACAA CGGCAAGAGT AGCTGCACCG TCAACGTCAA CGCGACGAGG ATCGTTCTGG CGACCGGTGG CGGCTCGATC ACGCTCGACG GATCGGGCGT GACGATCCAG GGGACGATTG CCCACATCAA TTGA
|
Protein sequence | MNRVFTLDSL HGDDLKFHTL DGSDELGRLF EFRIEALADS HSLSLKDLLG KPVTVRIEQQ DLSTRYLNGI VARASLSGRR AERYYGYELI VRPWLWLATR RSDCRIFQNK TVPEIMQEVL ATYGFPIENH LAESYVPRDY CVQYNETDAA FVSRLMEFEG IYFWFRHAED THTLMLGDAM SSHTVLPGYE TIPYIARDRT AIADEEHIDG WLPAQEVSVG RHQTTDYDYT KPRADLSSQK VDPRGHDHDS FASFEWPGGY RDDAPGAHYS RVRLEEQQAE HERASADTDV RGVAPGYLFT LEHCPRADQN REYLIVRCQY RFQENAYASD QGAEAVVHQT MMLVQPSSLP YRSPRDTPRP RTNGPQTATV VGPPGEEIWT DQYGRVKLQF RWDRYGQSNQ DSSCWVRVSS PWAGGGFGGV QIPRVGDEVV VDFLNGDPDE PIVTGRVFNG EKMPPWGLPG SATQSGLLSR SSPGGTTDHA NAFRFEDKKG AEQLWMHAER NFDAETELDH SLSVGNNHTH TVGNDETMQV KNNRQRSVGQ NETVNIGQNR VAQIGANETH GVTGNRSVSV DGNSSHTVTK GNHNLAVVAG THDVFVEGNS THVVGTGSYA TKVNTGNHSV DVNKVASLAA GQYIDMGSGK SGVSINKDNV GVSIGGTGGD TGVGISGQGG GVAIAGYGKG VNIAGYAPGV TIYGENDLNL SGKSTANLQA PTVNIDNGKS SCTVNVNATR IVLATGGGSI TLDGSGVTIQ GTIAHIN
|
| |