Gene Bcep18194_B1395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1395 
Symbol 
ID3753160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp1586054 
End bp1587007 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content69% 
IMG OID637766244 
Product3-hydroxyacyl-CoA dehydrogenase 
Protein accessionYP_372153 
Protein GI78062245 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00339633 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC CGATCAAGCG TGTCGCCGTC ATCGGCACCG GCGTCATCGG CGCGAGCTGG 
GCCGCGCTGT TTCTTGCGAA AGGGCTCGAC GTCGCGGCGA CCGACGTTGC GCCGGATGCC
GAAGCGCGGC TTCGTCAATA TCTCGACGCG GCCTGGCCCG CGCTGGAGGA ACTGGGGCTC
GCGCCGGCCG CATCTCGTGC ACGCCTGACG TTCACGCACG ATCTTGCCGA GGCCGTCGCC
GGCGCGGGGC TCGTGCAGGA AAACGGCCCC GAGCGGATCG ACTTCAAGCG CACGCTGTAC
GGCCAGCTCG ATGCGCTGCT GCCGCCCGAC GTGCCGATCG CGTCGAGTTC GTCGGGCCTC
ACGATGAGCG AGATCCAGAC AGGCTGCCCG GCGCACCCGG AGCGCTGCGT GATCGGCCAC
CCGTTCAATC CGCCGCACCT GATTCCGCTC GTCGAGATCG TCTCCGGCGC GCAGACGTCG
GAACAGACCG TCGAGAAAGT CACGGCGTTC TACACGTCGC TCGGCAAGCG CACGATCCGC
CTGCACAAGG AAGTGCCCGG GCACGTTGCG AACCGGTTGC AGGCCGCGCT GTGGCGCGAA
GTCGTGCATC TGGTGTCGAC CGGTGTGGTC AGCGTCGCGG ACGCGGATGC GGCCGTCTGC
TGGGGCCCCG GCCTGCGCTG GGGGCTGATG GGCCCGACGC TGCTGTTCCA TCTCGGCGGC
GGCCAGGGCG GCATCGAGCA CTTCTTCGAG CAGTTCACCG GGCCGATGAC CGCGTGGTGG
GCCGTGCTCG GCACGCCGCA GTTGTCGCCG GACGTGCAGC GCACGCTGAT CGACGGTGCG
CTGCAAGAAG CGGACGGCCG CTCGATCGGC GCGTTGGCCG ACCTGCGCGA TCGCCAGTTG
CTCGGCTTGT TGAAGCTGCG CGACGAAAGC GATCGCGTCG CGCGCAACGA TTGA
 
Protein sequence
MATPIKRVAV IGTGVIGASW AALFLAKGLD VAATDVAPDA EARLRQYLDA AWPALEELGL 
APAASRARLT FTHDLAEAVA GAGLVQENGP ERIDFKRTLY GQLDALLPPD VPIASSSSGL
TMSEIQTGCP AHPERCVIGH PFNPPHLIPL VEIVSGAQTS EQTVEKVTAF YTSLGKRTIR
LHKEVPGHVA NRLQAALWRE VVHLVSTGVV SVADADAAVC WGPGLRWGLM GPTLLFHLGG
GQGGIEHFFE QFTGPMTAWW AVLGTPQLSP DVQRTLIDGA LQEADGRSIG ALADLRDRQL
LGLLKLRDES DRVARND