Gene Bcep18194_B1195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B1195 
Symbol 
ID3752960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp1347721 
End bp1349169 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content68% 
IMG OID637766044 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_371953 
Protein GI78062045 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000171892 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.38657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC TGAAACTCGC GGTATTGCCT GCTGCGCTGC TGATGGCGAG CTGCACGATG 
ATCCCAACCT ATCATCGTCC CGACCCGTCG GTCGCCGCGC AGTACGCGAC GGCCGCGCAG
GACAACGCCG GCCAGCCGTC GGCCGCGGAA GTCGGCTGGC GCGACTTCTA CACTGACCCG
CACCTGCAGA CGCTGATCGG CATGGCGCTG GAAAACAACC GCGACCTGCG CGTGGCCGTG
CTGAACATCG AAGCGGCGCG CGCGCAGTAC CGGATCCAGC GGGCGGACCT GCTGCCGACG
CTGTCGGCCG GCGCGTCCGG GTCGATCCAG CGGCTGCCGT CGGACCTGTC GACGACGGGC
CAAGCCGGCG TCACGCGGTC CTACAACGTC GGGGGCGTCG CGTCGTACGA GCTGGACCTG
TTCGGCAAGA TCCGCAGCCT GACGGAGCAG GCGATGCAGA CGTATCTGGC GACCGAGGCC
ACGCGCAAGG CCACCCAGAT CAGCCTGATC GCCGAGGTGG CCACTGCGTG GCTGACGCTG
CAGGCCGACC AGGACATCAA GGTGCTGACG GCCGATACGC TCGCCAGCCA GCGGGCGTCG
CTGAAGATCA CCGAAGCGGG GTACCGCAAC GGCACGTCGT CGCTGCTCGA TCTGCGTCAG
GCAGAAACGA CCGTCCGAGC GGCGGAAGTG AATCTCGCGC AGTACGACCG GCAGGTGCGG
ACCGACATCA ACGCGCTGAC GCTGCTGGTG GGCGTGCCCC TCGATGACGC GCTGCTGTCG
CGCGAATCGC TGGCGACGGT TCGGCTCGAC GAGGACCTGC CGGCCGGACT GCCGTCGGAT
CTGCTCGCGC GGCGGCCGGA CATCATCGCC GCCGAGCATC AGCTGATGGC CTCGAATGCG
AACATCGGCG CCGCCCGCGC GGCGTTCTTC CCGAGCATTT CGCTGACGGC GAACGGCGGT
ACGGCCAGTG CGTCGTTGCG CAACCTGTTC GATCCCGGCA GCGCGGCGTG GTCGTTCGGG
CCGACGATCA GCGTGCCGAT CTTCGACTAC GGGCGCAACA GCGCGAACCT GGCGGTGTCG
AAGGTCAATC GCGACATCGA GGTCGCGACG TACCAGAAGG CGGTCCAGAC GGCGTTTCGC
GAAGTCTCCG ATGCGCTCGA CGGTCGTGCG ACCTGGGGCC AGCAGGAAAC GGCCCAGCGG
CTGCTGGTGG ATGCGAGCCA GTCGGCGTAC CGGTTGTCCG ACGTACGCTA TCGCGAGGGT
GTCGACGGGT ACGTGAACGT GCTCGTCAAC CAGCGGTCGC TGTACGACGC GCAGCAGAAC
CTGGTCAAGG TCCGGCTGGC GAGGATGTCG AACACGGTCG ACCTCTACCG CGCATTGGGC
GGCGGCTGGC AGGACCGCAC GGTGAAAGCC GACGTGTCGA CCGGGCAGGC CGCGCATCCG
CCGGGTTGA
 
Protein sequence
MKILKLAVLP AALLMASCTM IPTYHRPDPS VAAQYATAAQ DNAGQPSAAE VGWRDFYTDP 
HLQTLIGMAL ENNRDLRVAV LNIEAARAQY RIQRADLLPT LSAGASGSIQ RLPSDLSTTG
QAGVTRSYNV GGVASYELDL FGKIRSLTEQ AMQTYLATEA TRKATQISLI AEVATAWLTL
QADQDIKVLT ADTLASQRAS LKITEAGYRN GTSSLLDLRQ AETTVRAAEV NLAQYDRQVR
TDINALTLLV GVPLDDALLS RESLATVRLD EDLPAGLPSD LLARRPDIIA AEHQLMASNA
NIGAARAAFF PSISLTANGG TASASLRNLF DPGSAAWSFG PTISVPIFDY GRNSANLAVS
KVNRDIEVAT YQKAVQTAFR EVSDALDGRA TWGQQETAQR LLVDASQSAY RLSDVRYREG
VDGYVNVLVN QRSLYDAQQN LVKVRLARMS NTVDLYRALG GGWQDRTVKA DVSTGQAAHP
PG