| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B1157 |
|---|
| Symbol | |
|---|
| ID | 3752922 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 1299233 |
|---|
| End bp | 1300747 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637766006 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_371915 |
|---|
| Protein GI | 78062007 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.153598 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.545064 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG ACACCCTCCT CACTCCGCCG GCCGCCGAAA CGGCCCGCCG CGACGCGCCG
ACCGGGCTGA TCGTCGCCGC GCTGCTGCTC GTCATGCTGT TGTCCGCACT CGACCAGACG
ATCGTGTCGA CCGCGCTGCC GACGATCGTC GGCGAGCTCG GCGGGCTCGA CCAGTTGTCG
TGGGTCGTCA CCGCGTACCT GCTCTCCTCC ACCGTCGTGC TGCCGCTGTA CGGCAAGCTC
GGCGACCTGT ACGGCCGCAA GATCGTGCTG CAGGCCGCGA TCGTGCTGTT CCTGGCGGGC
TCCGCGCTGT GCGGCGTCGC GCAGGACATG ACGCAGCTGA TCGTGCTGCG CGCGCTGCAG
GGGCTGGGTG GCGGCGGCCT GATGGTCGTC ACGATGGCCG CGATCGGCGA TCTGGTGCCG
CCCGATCGCC GCGCGCGCTA CCAGGGGATG TTCGGCGGCG TGTACGGCCT TGCGACGATC
ATCGGCCCGC TGCTCGGCGG CTTCCTGGTC GAACACCTGT CGTGGCGCTG GATCTTCACG
ATCAACCTGC CGCTCGGCTT TCTCGCGCTC GCGGTGATCG GCGTCGCGTT CCGGCCGCAC
ACCGCGCACG TGAAACACCG GATCGACTAC ATGGGCGCCG TGTTCCTCGC CACCGCCCTC
ACCTGCGTGA TCCTGTTCAC GAGCGAAGGC GGCTCGCTGC TGCCGTGGAC GTCACCGCAG
CTGTGGATGA CGCTCGTGCT CGGTGTCGTC GCGATCGGCG GCTTCATTTA TGAAGAGCGG
CTCGCGGCCG AGCCGATCAT GCCGCTCGAA CTGTTCCGCC ATCGCACCTT CGTGCTGGTC
AGCCTGATCG GCTTCGTCGT CGGCATCGCG CTGTTCGGTT CGGTCACGTT CATCCCGCTC
TACCTGCAGG TCGTGAAGGG TTCGACGCCG TCGCAAGCCG GGATGCAGTT GCTGCCGATG
ATGGGCGGGA TGCTCGTGAC GTCGATCGTC AGCGGCCGGC TGATCTCGCG GCTCGGCTCG
TACCGGATGT TCCCGATCCT CGGCACGCTG GCCGGCGGCA TCGCGATGGC GCTGCTGTCG
ACGCTGACGC TCGATACGCC GCTGCACACG ATGTACGCAT ACATGGCGCT GCTCGGGATC
GGGCTCGGCA TGGTGATGCC CGTGCTCACG CTCGCCGTGC AGAACACAGT CGAATTCCGG
CATATGGGCG TTGCGACGTC GGGCGCGACG CTGTTCCGCT CGATCGGCGG CTCGCTCGGC
GTCGCGGCGT TCGGCGCGTT GTTCTCGCAC GGGCTGCAGT CGCGGGTGAT GGCTGCGCTG
CCGGCCGGCA CGGAGCTGCC GCCCGCGCTC GGCCCGGCTG CCGTGCATCA GTTGCCGGAT
GCCGTGCGCG ACGCGTATCT GCATGCGTTC GCCGGTTCGC TGCATGTCGT GTATCTGGCG
GCGGCGACCG TCATTGCGAT CGCGTTCGTG CTCGCGTGGT TCGTCGAGGA TGCGCCGCTG
CGCAAGCACA ACTGA
|
|---|
| Protein sequence | MTTDTLLTPP AAETARRDAP TGLIVAALLL VMLLSALDQT IVSTALPTIV GELGGLDQLS
WVVTAYLLSS TVVLPLYGKL GDLYGRKIVL QAAIVLFLAG SALCGVAQDM TQLIVLRALQ
GLGGGGLMVV TMAAIGDLVP PDRRARYQGM FGGVYGLATI IGPLLGGFLV EHLSWRWIFT
INLPLGFLAL AVIGVAFRPH TAHVKHRIDY MGAVFLATAL TCVILFTSEG GSLLPWTSPQ
LWMTLVLGVV AIGGFIYEER LAAEPIMPLE LFRHRTFVLV SLIGFVVGIA LFGSVTFIPL
YLQVVKGSTP SQAGMQLLPM MGGMLVTSIV SGRLISRLGS YRMFPILGTL AGGIAMALLS
TLTLDTPLHT MYAYMALLGI GLGMVMPVLT LAVQNTVEFR HMGVATSGAT LFRSIGGSLG
VAAFGALFSH GLQSRVMAAL PAGTELPPAL GPAAVHQLPD AVRDAYLHAF AGSLHVVYLA
AATVIAIAFV LAWFVEDAPL RKHN
|
|---|
| |