| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0992 |
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| Symbol | |
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| ID | 3752757 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 1110148 |
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| End bp | 1114257 |
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| Gene Length | 4110 bp |
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| Protein Length | 1369 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637765841 |
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| Product | hypothetical protein |
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| Protein accession | YP_371750 |
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| Protein GI | 78061842 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.894672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGT TCCAGTTCCT GTCGTTTCTG GCCTCGCGCC AGTTCCTCGC GTTCCTTGCA
CTGATCGTCG TTGCATTGGT GATCTGGTTC GTCGGCCCGT TTTTCGCGTT CGGCGGGCTC
AAGCCGCTCG CCAGTGCCGG CATGCGTGTG CTGCTGATCG CGCTGTTGCT CGCCGGCGTG
TTGCTCTGGC TCGTGGGCTG GTCGACGATC GTCGTGTTTG CCGCATTGCT TTGCTTGTTG
ATCTGGTATG CGGCACCGCT GCTCTCGTTC GGTCATGTGG CGCCGTTCGA GGCGGTGTCG
GCTCGGCTCA CCGCGATCGC GCTGGTGGCG GGCGCTTTCG TTCTTTTCGG GATGTTCCGT
CTGTGGCAGA AGATGCGGGA AGACGATGCG TTCCTGAAGA AGATGCTGCG CATGGACCGC
CGCAAGGATG ATTCACCCGC TGCACCGCGC TTGCGTCAAG TCGAAGGGAT CATGACGAGC
GCGCTCGCGC GTCTCAAATC GATGCGTACC GGCGCGCGAG GTCCTGGCAA GCTGTTCCAG
GGCAAGCGCT ATTTGTACGA ACTGCCCTGG TACATCACGC TCGGCTCGCA AGGGTCCGGC
AAGACCAGCG TACTGACGAA CGGCGGATTG GTGTTTCCCG TTGCAGAGCA GATGCAGCGC
GCGACCGGCG CACCGATCGG TGACGCCGCC GCGGTGGAAT GGTGGATGAC CAATGACGCG
GTGCTGATCG ACACGGCCGG CTACTACGCG CATCACGGCA TGTCGACGGC CGAGGACGTC
GACGCGCCCG TCTCGGAAAC GGGAAAGCCG GCAACCGGCG TTCCGGGCAA GGACGGCGCC
GATACCGGGC CGGCTGCGGA GGGCGCCGAA GACGATGCGA AGCGCAATGA GGCGTCGCAA
TCGAAAGCCG CCGCCGTGTC CGCAGCCAGC GGCTCTGCCG TTCCGCCCGG TCAAGGTGCG
GGGGAACGCC GGCAGAAGGT CGATCGTGCG GAATGGTTCG GATTTCTGGG CATGCTGCGC
CGGCATCGGC CTCGCGCGCC GATCAACGGT GCGTTGTTGA CGATCGATCT CGCCACGTTG
GCGGGCGCCG ACGAACAGGC GCGAGTGGCT GAGGCTGCCA TGTTGCGCGC GCGGCTGGCC
GAACTGAGGC AGGAACTGGG TATTCGCTTT CCTGTTTATG TGATGGTCAC GAAGATGGAC
CGTCTGACGG GTTTCGCCGA GTGTTTCGGG ACGCTGACGG CCGAGGGGAG AGTGCAGGCA
TGGGGCTTCA CGCTTCCGTA TGGCAAGGAA ACGGTTGCGA AGGAAGGCGT GCGCGAGCGC
TGCCGCGCCG AGCTTGCCGA ACTCGCACAA CGGCTCGGCG GTTCGATTGA TACCCATCTT
CAGGATGAGT ACGATCCCCG CAAGCGCCGG TCGCTTGCGG CATTGCCCGA GGAATTTTCG
GCGCTGCTCG AACCGCTGCT CGACCTGATC GATCGGGTAT TTCTCGACTC ACGGTACGAC
GATACCCAAC TCCACTCGAC GTTGCGCGGC GTGTATTTCA CGAGTGCGCG GCAACGGGGC
AGCGAGATCG TCGCGGAGCG CGGTACAGTC GTTCAACGCC TTCTGTCGAC CCAGGACCAC
GCTCCCGTGT CGTCGGTACG CGCCGAAGGC AACCAGGGCT TCTTCCTGCA TGACCTCCTG
ACTCGCGTCG TGTTCCCGGA AGCGCATCTG GTGAGGCCCA ACCTGCGCTG GGAATACCGC
TACCGGCTGT TGCGCCTGAT CGGCCACACA TTGGCGCTGC TGGTGTTCGT GTGGCTGGCC
ATCGGCCTGC GTGCAAGCTT CGGCAACAAC GGCGACTATC TCGATGCAAT CGGCCGCAAG
GTGAAGGCGC TCACGACCCG CGTCACCCAA CTCTACAAGG AACCCAAGCC GGAATCGGTG
CCCGACACGC TGACCGAGGC CCGCTATCTG GCGACCTTCC CGGGGCTGGA CCTGTCGAAT
CCGGACAGTA CGTGGCGCTA CGGTCTCTAT ACGCCAGCGG ACATCGCCAC CGAAAGCCGC
CATGCGTACG ACGCCCTCGA GGACAACCTG CTGCTGCCGC AGATCGTGTA CCGCCTGGAA
GACGTCATGT CCGGTGCGAT CGCCAGCAAG GCTCCAAAGG CGGCCTACGA TGCGCTGCGT
GTCTACCTGA TGTTGTACGA CAAGGCGAAG TTCAACGCCG CGGACGTCAA GGCCTGGGTG
CTTGACGACT GGGCGAAGAC CGACAGCGCG GCGGTTTTCG GTGGACGTGC GTCGATGATC
GACCACGTGC AGCAGCTTTT CTCCGGAGAG CGCGTGGTGC AATCGCCGCT GATTCGCAAC
GATGCGCTGG TGCAGCAGGC GCGCGCGTTT CTCGACGGCA GCAACGCAAC CGATCGCCTT
TATCAGCGTG CGAAGGCGGC GATGCTCAAG GAAGCGCCCG ACGAGTTTAC GCTCCTGCGC
GCGGTCGGCC CGCAGGCCGG CACGGTGTTC ACGCGGGCGA GCGACGCACC ATTGTCGCGT
GGCGTGGCGG GGCTTTTCAC GTTCGACGGC TATCGGAATC TGTTCGACAA GCGCTTGCCC
GAATTCGTGC AGATCGCGCG AGATGACGAT GCGTGGGTGA TGGGGCGCTC GTATCTGGCG
GGTTCGTCGG ATTTGGCTCA AAAAAAAACG GCTGAGATCG TGAGCAACGC GACTGGCGTG
GACGATGCGC TGACCGACGC GGTCCGTCGC GAATACCTGA TGGAATATGC GCAGCAGTGG
GACGCGTTTC TCAACGACAT CCGGACCGTG AGCGGCACGA GCCTTGCGTT CAATCTGAAG
GTGCTGGGCA GCTTCGCGGC GCCTGATTCG CCGCTCGTGC GGCTTGCGCG GGCAGCCGTG
CACGAGACGA CGCTCACGCA GGCGATGGCT GTGTCGGACG GGGCGCTGCT GCAGCGAGCC
GCCGACCAGC TCAATCAGAA GGCGGACAAG GCGTTGGGCA TTCGAGCATC GGAGCGCGTT
GAACGGGAAC TCGTCGACAA TCACTTTGCG GCGCTGCGCG AGGTCGTAAC CGGGAGCGTG
GATGCGCAAT CCGATACACG GCCAGCCGCC ACGCAGGCGG ACAAGACGGG GCTGGACGGC
GTCACCAACC TGCTGAACGA CTATTACACG GCGCTCACGG TTGCCGACAA TGCGTTGTCG
AACAACAGCA TGCCACCGGC GAGCGACGTA GCCGCGAAAC TGAAAATGGC GGCCGACACG
ATGCCCGCAC CGTTCCGCGC GGTATTGCTG CAGCTTGCCT CCGATGGCTC GCGCGAAGTC
AATCAAGGCA TCGGCCAATT GCTGTCGCGT CAGATGCAGG CGGTGGTCGG CGACACATGC
CGGCTGATTG TCGAGGGTAA CTATCCGTTT TCGCCGGACA GCAAGCGCGA TGTCAGCATC
GACGATTTCA CCCGGGTGTT TGCACAAGGG GGCTTGATCG ATGACTTCTT CACGAAAACG
CTTGCACCGT TCGTCGACAC AGCCGCGAAG CCTTGGCGCT ACCGGACGCT GCCGGGCGCG
ACCGAACCCA TGCAGGGGCC AGACCTGGAG CCGTTCGAGC ATGCGAAGGC CATCCGCGAC
GTCTTCTTCA ACGATCCCGG CCGCAAGCAG ATGACGTGGA AGGCCGACAT CCGGATTCCC
GAACTCGATC CGACGATCAT GAGTCTCTCG CTCGACATCG ACGGACAGAC GACGCTTTAC
CAACATGGTC CTGTTGCGCC TTTCACTGTC ACATGGCCGG GGCCGCGCGG CGGCGTCCAC
ACGGAAATCA CGGCCAGCCC GCGGATTCGG CCGGATACGT CGACGATCGC AGCAGACGGA
CCGTGGGCGT TGATGCGCCT GCTCCAGAAC GGTCGTGTGG TGGAGACGGC AACGCCGGGC
CGCACGCGCA TCGCGTTCGG TTTCGACGGT CGTCAGGCAG CACTCGACGT CGCAAGTGCC
GGGAGCGTCG CTAATCCGCT GACGAGTGAC GTGCTGAAGA CGTTCCGGTG CCCCAGCACG
ATGTCGGCGT TCAACCTGCC GGATAGTGGC CCGCCGCCGG GGTTGCCGCG AGGCATGTTG
CCGGCAAGCG CGGGTAGCGC TTCCCGCTGA
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| Protein sequence | MKKFQFLSFL ASRQFLAFLA LIVVALVIWF VGPFFAFGGL KPLASAGMRV LLIALLLAGV
LLWLVGWSTI VVFAALLCLL IWYAAPLLSF GHVAPFEAVS ARLTAIALVA GAFVLFGMFR
LWQKMREDDA FLKKMLRMDR RKDDSPAAPR LRQVEGIMTS ALARLKSMRT GARGPGKLFQ
GKRYLYELPW YITLGSQGSG KTSVLTNGGL VFPVAEQMQR ATGAPIGDAA AVEWWMTNDA
VLIDTAGYYA HHGMSTAEDV DAPVSETGKP ATGVPGKDGA DTGPAAEGAE DDAKRNEASQ
SKAAAVSAAS GSAVPPGQGA GERRQKVDRA EWFGFLGMLR RHRPRAPING ALLTIDLATL
AGADEQARVA EAAMLRARLA ELRQELGIRF PVYVMVTKMD RLTGFAECFG TLTAEGRVQA
WGFTLPYGKE TVAKEGVRER CRAELAELAQ RLGGSIDTHL QDEYDPRKRR SLAALPEEFS
ALLEPLLDLI DRVFLDSRYD DTQLHSTLRG VYFTSARQRG SEIVAERGTV VQRLLSTQDH
APVSSVRAEG NQGFFLHDLL TRVVFPEAHL VRPNLRWEYR YRLLRLIGHT LALLVFVWLA
IGLRASFGNN GDYLDAIGRK VKALTTRVTQ LYKEPKPESV PDTLTEARYL ATFPGLDLSN
PDSTWRYGLY TPADIATESR HAYDALEDNL LLPQIVYRLE DVMSGAIASK APKAAYDALR
VYLMLYDKAK FNAADVKAWV LDDWAKTDSA AVFGGRASMI DHVQQLFSGE RVVQSPLIRN
DALVQQARAF LDGSNATDRL YQRAKAAMLK EAPDEFTLLR AVGPQAGTVF TRASDAPLSR
GVAGLFTFDG YRNLFDKRLP EFVQIARDDD AWVMGRSYLA GSSDLAQKKT AEIVSNATGV
DDALTDAVRR EYLMEYAQQW DAFLNDIRTV SGTSLAFNLK VLGSFAAPDS PLVRLARAAV
HETTLTQAMA VSDGALLQRA ADQLNQKADK ALGIRASERV ERELVDNHFA ALREVVTGSV
DAQSDTRPAA TQADKTGLDG VTNLLNDYYT ALTVADNALS NNSMPPASDV AAKLKMAADT
MPAPFRAVLL QLASDGSREV NQGIGQLLSR QMQAVVGDTC RLIVEGNYPF SPDSKRDVSI
DDFTRVFAQG GLIDDFFTKT LAPFVDTAAK PWRYRTLPGA TEPMQGPDLE PFEHAKAIRD
VFFNDPGRKQ MTWKADIRIP ELDPTIMSLS LDIDGQTTLY QHGPVAPFTV TWPGPRGGVH
TEITASPRIR PDTSTIAADG PWALMRLLQN GRVVETATPG RTRIAFGFDG RQAALDVASA
GSVANPLTSD VLKTFRCPST MSAFNLPDSG PPPGLPRGML PASAGSASR
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