| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0648 |
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| Symbol | |
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| ID | 3752412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007511 |
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| Strand | + |
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| Start bp | 724363 |
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| End bp | 728703 |
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| Gene Length | 4341 bp |
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| Protein Length | 1446 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637765496 |
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| Product | Rhs family protein |
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| Protein accession | YP_371406 |
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| Protein GI | 78061498 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG3209] Rhs family protein
[COG4104] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000723582 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGCGG AAAACTTCGC GGCCGCTCGC TTCGAAGATC CGATCCAGCA CACGACGTTG
ATGGGGGAGC TTGTCGGCAC GGTCGGGTCC GTGGTCGGCG GCGCCATCGT CGGTGCGTTG
GTGGCAGAGG CGATGGAGGG GCTGATCTTC GCCGGCCTCG CTGCGCTCGA GATCGGCACC
GCGGGGTTGG CGACGCCGCT CGTGATTGCG ATCGGTGTAG GCGTGGCGGT CGGCTCGGGC
GCGCTGATGG AAGCGAGCGG CATGAACGAG GCCATCGACG ACGGTGCGAA GTCGGTGGCC
AATTCGCTCG TGCCACCCGT GATCAAAGGC AAGATCGCAA GCGGGTCGGG GAACGTCTAC
GTCAACAACA AGCCGGCTTC ACGGGCGGCG AAGCCGGGCG ATCTCGATAC CGTTGCGTGT
ACCGATCATC CCGGGCCGCA GATGATTGCG GACGGATCGG GCAGCGTTTA TATCAACGAT
CAACCTGCGG CGCGGGTCGG CGACAAGACG ACGTGCGACG GGACGATTGC CGAAGGCTCG
GACAACGTTT TCATCGGCGG CGGGACGCAG CGGGTGCGGG ACGTGAAGTC GGCCACGCGG
CTCGGGTGGC TGGGGGCTGC GCTCGGTATC GCGCTCGCGG TGTGTGGCCG CGGGAAGATG
AGCTGGGGCA ACTTTCTGAA GAGCAAGGTG CCGTGTATCG CGATGAATTT CGCGGCGGGT
GCGTTCGGTA CCTGGCTGGG TAGTCTGGCG CGGCCGTCGG CGGGGCATCC GGTTAACGTC
ATTACCGGCA GCAAGGTGCT CGATGGCACG GACGATACCG ACTTCGTATT GCCCGGACCG
CTGCCGATCG TCTGGCAGCG TTTCTATAGC AGCCTCGATG ATCGTGCAGA CAGCCTGTTC
GGGACGGGAT GGAGCGTGCC GATCAGCGTC GAGTTGCGAC TCGCGCGTGA ACATGGCGAG
GTTGCGTCGA TTACGTACTG GGACGAGCAG GGGCGCGAGA TCGTGTTCCC GGCTGTGTCG
CCGGGTGAGA GCCATTTCAG CGTGCCGGAA GGCATTTACC TGATCTGTAC CGAGGGCGGC
CACTATGTGG TCGAAACGGT CGACGGGGTG TATCGCGATT TCGGTCGTGC TCGTACCGAT
GCGGATGGCG AGACGCTCAA GCTGTGGCGC CTCGAAGATC GCAACGGTAA CTGGATCGAG
GTTGAGCGAG AGGCCCGCGA TGAGGTTGCG CGGCCCGTAC GGTTGCACGA TAGCGCCGGT
CGCTTGCTGA CACTGTCCTA CGACAAGTTG CATCCGCAAC GTATTGCCGC GATCGAATTG
ACCCGTGGCG TTGACGGCGA ACAACCCGAC ACGTTGGTGC GTTACGCGTA CAGCAATGCC
GGCGAGCTGG TGGCGGTTAC CGATCGTAGC GGCCATATCG GGCGACGCTT TGCATACGAG
CATGGACTGA TGGTCCAGCA CACGCTGCGT GGCGGCCTGC AGTGTTTTTA CGCGTGGCAG
GGTGTCGGCC GCGATGCGCG CGTCGTGCGC CACTGGACCA ACGACGGCGA AGCGTACACG
TTCAACGCGG ATCTCGCGCA GCGTTCGGTG ACGATCACCG ACCAGATCGG TCGTGTGACG
CGCTGGACGT GGAACGAGGA TCAACAGCCG ACGAGCCATA CGGATGCCGA AGGCCACGTG
TGGCAGTTGG AGTGGAACGC AAAGCGGCAG TTGGTCAGCA CGACCGATCC GGCGGGGAAC
ACGACGCGCT TCGAATATGA CGAGCGTGGG CGGCAGACGC AGCGTATCGA TGCGCTTGGC
CAGGTTGAGC GGACCGAGTG GAACGGGTAC TACGACCTGC CCGTAGCGGA AACCGATCCG
GCGAATTCGC GCTGGATTTA CCGTTACGAC GATCTCGGCA ACCTGACGAT GACGCGTGAT
CCGGCGGGTT TTGCGACCGA GTATCACCGG GACGAGCGCG GGCTCGTGCA TACGATTCGT
GATGCGCGGG GTGGGTACAA ATTCCTCGAG TGGAATGGCC GTGCGCAGTT GACGTCGTAT
ACCGATTGTT CCGGCAAGGT CACGCGGTTT GCGTATGACG CACGTGGGGC GCTCGCACGT
GTGACCGATG CGGCCGGACA GTCGACCGTG TACGAAACGG ATGCGATGGG GCGGGTCACG
GGGATCGGGA CGGCCGATGG TGCGCGTCAG GCGTTCTTTT ATGACGTGGC TGGGCGTCTT
ATTGAGGTTG TTGATGCGAA TCAGCGCAGC ACGCGGTATG AACTCAATCC GCGTGGGCTG
CTGCTTTCGC GTACCGACGC GGCTAATCGC GTCGTGCGAT TCGGGTACGA CGATGCGTTT
CGGCTTGCGA GCTTGACCAA CGAAAATCGT GAGTCGTATC GCTTTCAGTA TGACCGTCGC
GATCTGGTGG CTGAGCAGAT CGGACTTGAT GGCCACAAGC GCGCATACGA ATACGACGTG
TGTGGCCAAG GCACGATCGT GCGGGATGGA AAGATCGAGA CGCGATACGA GCGCGATGCG
ATCGGACGAC TGACGGCGAA GCAAGCCACG CATGAGCGAT GTGAATACCT GTACGACAAG
GCAAGCCGAA TCGCGTCGGC CGAGTTGTAC ACGCTGGCCG CTCGTGGTTC GTCGCTGAAG
AATCGGGTCA GTCTGAAGTA TGGGGCGCGC GGTGAGGTGC TCGAGGAGTA CACGCCGACG
GGCTGGCTTG CGCATACCTA CGATGAGCTA GGTAACCGCG TCAGCACCAC GATCTCGGGC
GAGCGTACGA TCGATTGGCT GCATTACGGT TCGGGGCACG TGCACCAGAT CCGCGTTGAC
GGTGCTGCAG TGGCCGACAT CGAGCGCGAT GATCTGCATC GGGAAGTTCT GCGGACGCAA
GGCAAGCTGA CCAGTCATTT CGGGTACGAC GCGGTGGGCC GTCGTGCCCG GCAACTTGCA
CAGCGAGGTC GGGCGGCGGA CGAGTTGTTG GCGAAGCAAT GGCAATACGA TGCCGCAGGC
GACGTGATCC AGAAGCGGGA TCTGCGCTAT GGCACGACGA GTTATCGCTA TGACGCGACG
GGGCGCATTG AACAGGCGGC CGGGCCGGGA TTGCCGTCCG AAGTGTTTCG CTGGGACGCG
GCGGCGAACC TGGTGTCGAG CGATCACCCG GGAGGCTTCG TTGAGCACAA CCGGCTCAAG
ATGTTCGAGG ACAAGCGCTT CGAGTACGAC GTATATGGAA GGCTTGTTCG CAAGTTGAGT
GGGCACGGGC CGGCCAAAGA GTTGGTGCTT GAGTACGACG ACTGGAACCA GTTGAAGACC
GTCGTGACGA AGGACCGGCT TGGCGTCGGG ACGACGCATT TCGAATACGA CGCGTTCGGC
CGGCGGATTC GGAAGCTCAA TGGGGGTTAC GCGAGTACGG ATTTCCTGTG GGACGGCATG
CGGCTCGTGC AGGAGACGTA CCACGACCGT CAGGGCGAGG AAGCGCTGAC GTACTTGTAT
GAGTCCAACA GCTATGTGCC GCTGGCGCGG ATCGACCAGG GTAAGGTGGC GGCTAACGAC
GCCAATGCGC GGGATGCGGT CTACTATTTC CACAACGACG TGTCGGGGTT GCCGGAGGAA
CTGACTAACG CTGAAGGCGA GTTGATTTGG CAGGCTCGAT ACAAGGTATG GGGCAACGCG
GTGCAGGAGG AGTGGATTGC GCGGACTTCG CAGCAATCGG TGCCGGAATG GGGCGAGGTG
CAATTGGCTT CTGCAACACC TGCCCACGTG CCACGGCCGC AGAACCTGCG TTTCCAAGGG
CAATACCTGG ATCGGGAAAC CGGGCTGCAC TACAACACGT TCCGGTTCTA TGATCCGGAC
ATCGGACGCT TCATTAATCC GGATCCGATT GGCCTGAGTG GCGGGCATAA TCTTTATGCG
TATGCTGAGA GTCCACTGAT ATGGATTGAT CCGTGGGGAT GGTGCCGACG GGGTAACCAA
GCGACTAAGA ACCACATGGA TGGAGTCAGA GATCAGTATC TTGCGGATAA TCCAACTGAT
CGACACGTTG CAGGCGGACG TAACGCTCTC ACAGGAGGGG AGCGCCCAGA GACCTATTTG
CCACCATTAA GTGGAAATGG GCGAAAGGGT AGTTCCTATA CAGACATGAC GTTCACAGAT
TCTCAAGGCA ATCCTGTCTA TATCCAGACA GTAGATAAGG GTTCAGTGAA CGGGATGTCT
CAACGGGAGT GGACGAACGC TAATCGCATC ACTCAACAGG ATCCGAGTGC GATTGTCATC
ACGGTTGTTA AGGGATCAAC CTTGCAACCG GGAGACTTGA ATACGGCGAC GATGACGCCT
GGAACTGTCA CTACCCGATA A
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| Protein sequence | MSAENFAAAR FEDPIQHTTL MGELVGTVGS VVGGAIVGAL VAEAMEGLIF AGLAALEIGT
AGLATPLVIA IGVGVAVGSG ALMEASGMNE AIDDGAKSVA NSLVPPVIKG KIASGSGNVY
VNNKPASRAA KPGDLDTVAC TDHPGPQMIA DGSGSVYIND QPAARVGDKT TCDGTIAEGS
DNVFIGGGTQ RVRDVKSATR LGWLGAALGI ALAVCGRGKM SWGNFLKSKV PCIAMNFAAG
AFGTWLGSLA RPSAGHPVNV ITGSKVLDGT DDTDFVLPGP LPIVWQRFYS SLDDRADSLF
GTGWSVPISV ELRLAREHGE VASITYWDEQ GREIVFPAVS PGESHFSVPE GIYLICTEGG
HYVVETVDGV YRDFGRARTD ADGETLKLWR LEDRNGNWIE VEREARDEVA RPVRLHDSAG
RLLTLSYDKL HPQRIAAIEL TRGVDGEQPD TLVRYAYSNA GELVAVTDRS GHIGRRFAYE
HGLMVQHTLR GGLQCFYAWQ GVGRDARVVR HWTNDGEAYT FNADLAQRSV TITDQIGRVT
RWTWNEDQQP TSHTDAEGHV WQLEWNAKRQ LVSTTDPAGN TTRFEYDERG RQTQRIDALG
QVERTEWNGY YDLPVAETDP ANSRWIYRYD DLGNLTMTRD PAGFATEYHR DERGLVHTIR
DARGGYKFLE WNGRAQLTSY TDCSGKVTRF AYDARGALAR VTDAAGQSTV YETDAMGRVT
GIGTADGARQ AFFYDVAGRL IEVVDANQRS TRYELNPRGL LLSRTDAANR VVRFGYDDAF
RLASLTNENR ESYRFQYDRR DLVAEQIGLD GHKRAYEYDV CGQGTIVRDG KIETRYERDA
IGRLTAKQAT HERCEYLYDK ASRIASAELY TLAARGSSLK NRVSLKYGAR GEVLEEYTPT
GWLAHTYDEL GNRVSTTISG ERTIDWLHYG SGHVHQIRVD GAAVADIERD DLHREVLRTQ
GKLTSHFGYD AVGRRARQLA QRGRAADELL AKQWQYDAAG DVIQKRDLRY GTTSYRYDAT
GRIEQAAGPG LPSEVFRWDA AANLVSSDHP GGFVEHNRLK MFEDKRFEYD VYGRLVRKLS
GHGPAKELVL EYDDWNQLKT VVTKDRLGVG TTHFEYDAFG RRIRKLNGGY ASTDFLWDGM
RLVQETYHDR QGEEALTYLY ESNSYVPLAR IDQGKVAAND ANARDAVYYF HNDVSGLPEE
LTNAEGELIW QARYKVWGNA VQEEWIARTS QQSVPEWGEV QLASATPAHV PRPQNLRFQG
QYLDRETGLH YNTFRFYDPD IGRFINPDPI GLSGGHNLYA YAESPLIWID PWGWCRRGNQ
ATKNHMDGVR DQYLADNPTD RHVAGGRNAL TGGERPETYL PPLSGNGRKG SSYTDMTFTD
SQGNPVYIQT VDKGSVNGMS QREWTNANRI TQQDPSAIVI TVVKGSTLQP GDLNTATMTP
GTVTTR
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