Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B0458 |
Symbol | |
ID | 3752222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 513996 |
End bp | 514943 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637765306 |
Product | ABC proline/glycine betaine transporter, periplasmic ligand binding protein |
Protein accession | YP_371216 |
Protein GI | 78061308 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
TIGRFAM ID | [TIGR03414] choline ABC transporter, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.887011 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0573293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCC TATTGATCGC AGCGGTGTGC GGGATCGGGA TAACCGCGCC GATGTCGGCC GTGTATGCGG CCGACCCGCC CGTGTGCAAG AACGTGCGCT TCGCGGACGT CGGCTGGTCC GACATCGCGG CGACCACGGG CCTCGCGTCG ACGATGCTGC AGGGCCTCGG CTACAGCCCG ACGAAGACGA TCGCCTCGGT GCCGATCACG TTCGCCGGCA TCAAGAGCAA GCAGATCGAC GTGTTCCTCG GCTACTGGTC GCCGACGATG GACCCGATCA TCCAGCCGTT CACGAAGGCC GGCCAGATCA AGGTGCTTTC GACGCCGAAC CTGACCGGCG CGAAATACAC GCTCGCGGTG CCCGACTACG TGTACCAGGG TGGCCTGAAG TCGTTCGCGG ATATTCAGAA GTACGCGGAC AAGCTGAACG GCAAGATCTA CGGGATCGAA CCGGGCAACG ACGGCAACCT GCTGATCAAG AAGATGATCG ACGGTAACCA GTTCGGCCTC GGCAAGTTCA AGATGGTCGA GTCGAGCGAG GCCGGGATGC TGGTCGAGGT GAATCGCGCG ATCCGCGACA AGCAGTGGAT CGTGTTCCTT GGCTGGGAAC CGCATCCGAT GAACGTGCAG ATGAAGATCG ACTACCTGAC CGGCGGCGAC GACGTGTTCG GCCCGAACTA CGGCGAAGCG AAGGTGCTGA CGGCGACGCC GCCCGACTAC GCGCAGCGCT GCCCGAACGT CGCGAAGTTC GTGTCGAACC TGCAGTTCAC GACGTCGATC GAGAACCACG TGATGATGCC GATCATGAAC AAGGAAGATC CGAACAAGGC GGCGGCCGAG TGGCTGAAGG CGAACCCGCA GGCGCTCGAC AAGTGGCTCG CGGGCGTCAC GACGCTCGAC GGCAAGCCGG GCCTGCCGGC GGTGAAGGCT TATCTCGGCG TGCATTGA
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Protein sequence | MKRLLIAAVC GIGITAPMSA VYAADPPVCK NVRFADVGWS DIAATTGLAS TMLQGLGYSP TKTIASVPIT FAGIKSKQID VFLGYWSPTM DPIIQPFTKA GQIKVLSTPN LTGAKYTLAV PDYVYQGGLK SFADIQKYAD KLNGKIYGIE PGNDGNLLIK KMIDGNQFGL GKFKMVESSE AGMLVEVNRA IRDKQWIVFL GWEPHPMNVQ MKIDYLTGGD DVFGPNYGEA KVLTATPPDY AQRCPNVAKF VSNLQFTTSI ENHVMMPIMN KEDPNKAAAE WLKANPQALD KWLAGVTTLD GKPGLPAVKA YLGVH
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