Gene Bcep18194_B0458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_B0458 
Symbol 
ID3752222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007511 
Strand
Start bp513996 
End bp514943 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content63% 
IMG OID637765306 
ProductABC proline/glycine betaine transporter, periplasmic ligand binding protein 
Protein accessionYP_371216 
Protein GI78061308 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID[TIGR03414] choline ABC transporter, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.887011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0573293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC TATTGATCGC AGCGGTGTGC GGGATCGGGA TAACCGCGCC GATGTCGGCC 
GTGTATGCGG CCGACCCGCC CGTGTGCAAG AACGTGCGCT TCGCGGACGT CGGCTGGTCC
GACATCGCGG CGACCACGGG CCTCGCGTCG ACGATGCTGC AGGGCCTCGG CTACAGCCCG
ACGAAGACGA TCGCCTCGGT GCCGATCACG TTCGCCGGCA TCAAGAGCAA GCAGATCGAC
GTGTTCCTCG GCTACTGGTC GCCGACGATG GACCCGATCA TCCAGCCGTT CACGAAGGCC
GGCCAGATCA AGGTGCTTTC GACGCCGAAC CTGACCGGCG CGAAATACAC GCTCGCGGTG
CCCGACTACG TGTACCAGGG TGGCCTGAAG TCGTTCGCGG ATATTCAGAA GTACGCGGAC
AAGCTGAACG GCAAGATCTA CGGGATCGAA CCGGGCAACG ACGGCAACCT GCTGATCAAG
AAGATGATCG ACGGTAACCA GTTCGGCCTC GGCAAGTTCA AGATGGTCGA GTCGAGCGAG
GCCGGGATGC TGGTCGAGGT GAATCGCGCG ATCCGCGACA AGCAGTGGAT CGTGTTCCTT
GGCTGGGAAC CGCATCCGAT GAACGTGCAG ATGAAGATCG ACTACCTGAC CGGCGGCGAC
GACGTGTTCG GCCCGAACTA CGGCGAAGCG AAGGTGCTGA CGGCGACGCC GCCCGACTAC
GCGCAGCGCT GCCCGAACGT CGCGAAGTTC GTGTCGAACC TGCAGTTCAC GACGTCGATC
GAGAACCACG TGATGATGCC GATCATGAAC AAGGAAGATC CGAACAAGGC GGCGGCCGAG
TGGCTGAAGG CGAACCCGCA GGCGCTCGAC AAGTGGCTCG CGGGCGTCAC GACGCTCGAC
GGCAAGCCGG GCCTGCCGGC GGTGAAGGCT TATCTCGGCG TGCATTGA
 
Protein sequence
MKRLLIAAVC GIGITAPMSA VYAADPPVCK NVRFADVGWS DIAATTGLAS TMLQGLGYSP 
TKTIASVPIT FAGIKSKQID VFLGYWSPTM DPIIQPFTKA GQIKVLSTPN LTGAKYTLAV
PDYVYQGGLK SFADIQKYAD KLNGKIYGIE PGNDGNLLIK KMIDGNQFGL GKFKMVESSE
AGMLVEVNRA IRDKQWIVFL GWEPHPMNVQ MKIDYLTGGD DVFGPNYGEA KVLTATPPDY
AQRCPNVAKF VSNLQFTTSI ENHVMMPIMN KEDPNKAAAE WLKANPQALD KWLAGVTTLD
GKPGLPAVKA YLGVH