| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0343 |
|---|
| Symbol | |
|---|
| ID | 3752102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | - |
|---|
| Start bp | 366233 |
|---|
| End bp | 368125 |
|---|
| Gene Length | 1893 bp |
|---|
| Protein Length | 630 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637765188 |
|---|
| Product | 4-hydroxyphenylpyruvate dioxygenase |
|---|
| Protein accession | YP_371103 |
|---|
| Protein GI | 78061195 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases
[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
|---|
| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.880013 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCT CGATCGCCAC CGTGTCACTG TCCGGCACGC TCGCCGAGAA ACTCGCCGCC
ATCCAGGCCG CAGGCTTCGA CGGCGTCGAA ATCTTCGAAA ACGACCTCGT CTACTTCGAT
GGATCGCCGG CCGACGTCCG GCGCATGGCC GCGGATCTCG GCCTCGACAT CGTGCTGTTC
CAGCCGTTTC GCGACTTCGA GGGCGTGAGC GCGACCCAGC TCGCCCGCAA CCTCGACCGG
ATCAAGCGCA AGTTCGACGT GATGCATGCG CTCGGCACCG ACCGCATCCT GGTGTGCAGC
AACGTGTCGG CCGACACGAT CGCGGACGAC GGGCTGCTCG TCGACCAGCT CGGTACGCTC
GCTGAGGCCG CGCGGCAGGC CGGCGTGGTC GCCGCGTACG AAGCGCTCGC GTGGGGCCGT
GTCGTGAAGC GGTACGGCCA TGCGTGGCAA CTCGTGAATA CCGTGAACAG CCCGCATCTC
GGCCTGGCGC TCGACAGCTT CCACACGCTG TCGCTCGACG ATTCGCCGGA CGCAATCGCC
GACATCCCCG GCGACCGGAT CGCGTTCGTG CAGATCGCCG ATGCGCCGAA GCTCGCGATG
GACGTGCTCG AATGGAGCCG CCATTACCGC TCGTTCCCGG GCCAGGGCGA TTTCGACCTC
GCGCACTTCA CTGCGCGCGT GATCGAGTCC GGCTATACGG GGCCGCTGTC GCTCGAGATC
TTCAACGACG GCTTCCGCGC GGCGCCCACG GCGATCACGG CCGCCGACGG CCATCGCTCG
CTGCTCTATC TGGAGGAACT GACGCGCGAG CGGCTCGCAC AGGACGGCCA TGCGCCGGCC
GCCAGCCAGC CGCTGTTCGC GCCGCCGGCG CCGCCCGCGC ACGTCGGGTT CCAGTTCATC
GAATTCGCGG TCGACGCGCA GGCGGCGGCG ACCGTCGGCG AATGGCTCGG CCGGATGCGC
TTCCGGCTCG CGGGCCGCCA TCGGTCGAAG GACGTGACGC TGTTCCAGCA CGGCGCCGCG
TCGATCGTGC TGAACGCGGA GCGCGATTCG TTCGCCGATG CGTTCTTCCA GCAGCATGGG
CTGTCGCTGT GTGCATCGGC ATTCCGCGTC GACGACGCGA ACGTGGCGTT CGAGCGCGCA
GCAGGCTTCG GCTATGCGCC GTTCTCCGGC CGCGTCGGGC CGAACGAGCG CGTGTTGCCG
AGCGTGCAGG CGCCGGACGG CAGCCTCGAA TACTTCGTCG ACGAAGCGCC GAACGCGCCG
ACGCTGTACG AATCGGATTT CGTGCTGACC GACATCGACG GCCCGAGCGA AGTCGGGCCG
CTGACCGGTA TCGACCATGT GTGCCTCGCC CTGCCGGCCG ACGCGCTCGA TACGTGGATC
CTGTTCTTCA AGACGGCATT CGGCTTCGAG GCCGAGCGCA GCTGGCTCGT GCCCGACCCG
TACGGGCTAA TGCGCAGCCG CGCGGTGCGC AGCGCCGACG GCTCGGTGCG GATCGCGCTG
AACGCGTCGG TCGACCGGCA CACGGCGGTG GCCGAATCGC TCGACCGCTA CCACGGCACA
GGGCTGAACC ACGTCGCATT CCGCACGGAC GACATCGTGA AGACGATCGC CGCGTTCGCG
GCCGACGGCA TTCCGTTCCT GCGCATTCCG CCGAACTACT ACGACGATCT CGCCGCACGC
TACGCGTTGT CGGACGAACT GATCGACACG CTGAGCACGC ATCACCTGCT GTACGACCGC
GACGAGCACG GCGGCGAATT CCTGCATGCG TATACAGAAC TGGTCGACAA CCGCTTCTCG
CTCGAGATCG TCGAGCGGCG CGGCGGATAC GACGGCTATG GCGCGACAAA CGCGGCCGTG
CGGCTCGCCG CACAGGCGCA GCGCAGGAAA TAA
|
|---|
| Protein sequence | MQRSIATVSL SGTLAEKLAA IQAAGFDGVE IFENDLVYFD GSPADVRRMA ADLGLDIVLF
QPFRDFEGVS ATQLARNLDR IKRKFDVMHA LGTDRILVCS NVSADTIADD GLLVDQLGTL
AEAARQAGVV AAYEALAWGR VVKRYGHAWQ LVNTVNSPHL GLALDSFHTL SLDDSPDAIA
DIPGDRIAFV QIADAPKLAM DVLEWSRHYR SFPGQGDFDL AHFTARVIES GYTGPLSLEI
FNDGFRAAPT AITAADGHRS LLYLEELTRE RLAQDGHAPA ASQPLFAPPA PPAHVGFQFI
EFAVDAQAAA TVGEWLGRMR FRLAGRHRSK DVTLFQHGAA SIVLNAERDS FADAFFQQHG
LSLCASAFRV DDANVAFERA AGFGYAPFSG RVGPNERVLP SVQAPDGSLE YFVDEAPNAP
TLYESDFVLT DIDGPSEVGP LTGIDHVCLA LPADALDTWI LFFKTAFGFE AERSWLVPDP
YGLMRSRAVR SADGSVRIAL NASVDRHTAV AESLDRYHGT GLNHVAFRTD DIVKTIAAFA
ADGIPFLRIP PNYYDDLAAR YALSDELIDT LSTHHLLYDR DEHGGEFLHA YTELVDNRFS
LEIVERRGGY DGYGATNAAV RLAAQAQRRK
|
|---|
| |