| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_B0260 |
|---|
| Symbol | |
|---|
| ID | 3752019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007511 |
|---|
| Strand | + |
|---|
| Start bp | 276595 |
|---|
| End bp | 277716 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637765105 |
|---|
| Product | outer membrane protein (porin) |
|---|
| Protein accession | YP_371020 |
|---|
| Protein GI | 78061112 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGT CGGCAAGCCG CCGCCGCGCG GCCATGATTT TCGCGGTATT GAATGCAGCG
GCCGCAAGCG CCGCGCATGC ACAGAGCAGC GTGACGCTGT ACGGCAGCCT GGATGCCGGC
GTTGCGTACG TGAACAATCG CGCGGGCAGC CCGCAGGCCG CGATGCTGCA GGGCGTGATG
CAGCCCGACC GCATCGGCTT CCTCGGCAAC GAGGAACTGG GCGCCGGCTG GCGTGCGGTG
TTCCGGCTCG AGAACGGCTT CGCGACCAAC ACGGGCGCGC TGATGCGCAG CGGCACGCTG
TTCAACCGGC AGGCCTACGT CGGGCTGTCG TCGGAGCGGG CCGGCACGAT CACGCTCGGC
CAGCAGACCG CGTTCAACTA TGACTGGCTC GCGCCGATGG GCAACGGCTT TCAGTCGTCG
AACCTGCTCG CGGCCCACCC GGGCAACCTC GACGGGCTGG TCGAGACGAC GTCGGCGCAG
GAGAGCAACG TCGTGAAATA CCGCTCGCCC GCGTTGTACG GGTTGAGGGT CGGACTGTTG
CTCGGGTTCG GGGGCGTGCC CGGCAATTTC TCGAGCGGAC GCATCGCGGG AGCAGGCATC
GATTACGTGA ACGGATCGTT CGGGCTCGCC GCCGCGTACG TGAACGAGCA CGACCGCGCG
CTCGGCCCGA TGCTTGGCGA TACGACTGCG GGCCTCGGCC TGTCGACGTT CCAGGGGCGT
CCGGCGCTGT CGTATGTGGC CGACAAGGTC GAGAACGCGG GCATCGGCGC GCGCTACGAC
TGGGGCACCG TGCGGCTGCA CGCGCTGTAC ACGTACGTGA GGCTGAAGGC CGGCGCGCAG
ACGGATTCGT ATCGCACGTT CGATGCGGGC GCCACGTGGC AGGCGACGCC GGCCAATGCG
GTGGCGGGCG GGATGTCGAC GACGTCGTTC ATCGGCCGCC GCTATCTGTC GGCTTCGCTC
GGCGACGTGT ATGCGTTGTC GAAGCGCACG CAGGTCTACC TGCATGCGGT TGCGCAGCAG
GCGACGGGGA GCGCGGCGGC GCGCGCCGCG ATCTTCGCGA TCGGTGCGTC GGGCACGCAG
CGGCAACTCG CGATCGTGGC CGGGATTCAT CATCTGTTTT GA
|
|---|
| Protein sequence | MQTSASRRRA AMIFAVLNAA AASAAHAQSS VTLYGSLDAG VAYVNNRAGS PQAAMLQGVM
QPDRIGFLGN EELGAGWRAV FRLENGFATN TGALMRSGTL FNRQAYVGLS SERAGTITLG
QQTAFNYDWL APMGNGFQSS NLLAAHPGNL DGLVETTSAQ ESNVVKYRSP ALYGLRVGLL
LGFGGVPGNF SSGRIAGAGI DYVNGSFGLA AAYVNEHDRA LGPMLGDTTA GLGLSTFQGR
PALSYVADKV ENAGIGARYD WGTVRLHALY TYVRLKAGAQ TDSYRTFDAG ATWQATPANA
VAGGMSTTSF IGRRYLSASL GDVYALSKRT QVYLHAVAQQ ATGSAAARAA IFAIGASGTQ
RQLAIVAGIH HLF
|
|---|
| |