Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_B0196 |
Symbol | |
ID | 3751894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007511 |
Strand | + |
Start bp | 212323 |
End bp | 213027 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637765041 |
Product | short chain dehydrogenase |
Protein accession | YP_370956 |
Protein GI | 78061048 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.641579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.448139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATCG AAGGTGCAGT CGTTTTCATC ACGGGCGCGA ACCGCGGGCT CGGGCTCGAG TTCGCGAAGC AGGCGCTCGC CAGAGGGGCG CGCAAGGTCT ATGCGGCGGC GCGCGATCCG GGCACCGTGA CGCTGCCGGG CGTCGTGCCG GTGAAGCTCG ACGTGACCGA TCCGGCGGCC GTTGCCGCGG CGGCCGATGC CGCACGCGAC GTCACGCTGT TGATCAACAA CGCGGGCATC GCGCGGCTCG GCAGCCTGAC CGACGACGGC GCGCCCGACG CGTTGCGCGA TCACTTCGAA ACCAACGTGT TCGGGATGCT GGCGATGTCG CGCGCGTTCG CGGGCATCCT CGCCGGCCAG GGCGGCGGCG CGATCCTGAA CATCCTGTCC GTTGCGAGCT GGGTGAACCG GCCGATCCTG GCGGGCTACG GCGTGTCGAA ATCGGCCGCG TGGGCGTTGA CCAACGGCCT GCGCCATTCG CTGCGCGAAC AGCGCACACA GGTCGTCGGG CTGCATGCCG GCTTCATCGA TACCGACCTG ACGGCTGGCC TCGACGTGCC GAAGGCGACG CCGGCCGACG TCGTGCGCCA GGCGTACGAA GCGATCGAAG CGGGGGAGGA GGAGGTGTCC ACCGACGAAC TCACGCGGCA CGTGAAGGCC ACGCTGTCGG CGGGCGTCTA TCTGGAAGAG CCGGCGCAGC GTTGA
|
Protein sequence | MKIEGAVVFI TGANRGLGLE FAKQALARGA RKVYAAARDP GTVTLPGVVP VKLDVTDPAA VAAAADAARD VTLLINNAGI ARLGSLTDDG APDALRDHFE TNVFGMLAMS RAFAGILAGQ GGGAILNILS VASWVNRPIL AGYGVSKSAA WALTNGLRHS LREQRTQVVG LHAGFIDTDL TAGLDVPKAT PADVVRQAYE AIEAGEEEVS TDELTRHVKA TLSAGVYLEE PAQR
|
| |