Gene Bcep18194_A6442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A6442 
SymbolhslU 
ID3751675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp3608145 
End bp3609488 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content63% 
IMG OID637764763 
ProductATP-dependent protease ATP-binding subunit HslU 
Protein accessionYP_370680 
Protein GI78067911 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit 
TIGRFAM ID[TIGR00390] ATP-dependent protease HslVU, ATPase subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.377581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCA TGACCCCTGC CGAGATCGTC TCGGAACTCG ACAAGCACAT CATCGGCCAG 
GCGAAGGCGA AGAAAGCCGT CGCGGTTGCG CTGCGCAACC GCTGGCGCCG CCAGCAGGTC
GCCGACCCGC TGCGCCAGGA AATCACGCCG AAGAACATCC TGATGATCGG GCCGACGGGT
GTCGGCAAGA CCGAAATCGC TCGCCGCCTC GCGAAGCTCG CCGACGCGCC GTTCATCAAG
ATCGAAGCGA CCAAATTCAC CGAAGTCGGC TACGTCGGCC GCGACGTCGA CAGCATCGTG
CGCGACCTGA TCGAGATCTC GGTCAAGCAG ACGCGTGAAA CCGAGATGCG CAAGGTGCGC
AGCAAGGCGA CCGACCAGGC GGAAGACCGC ATCCTCGACA TCCTGCTGCC GCAACCGCGC
GCGGTGGGCT TCGGCGGCAA CGCCGAACAC GCGAACGACG ACAACAACGC GACGCGCCAG
ACGTTCCGCA AGCGCCTGCG TGAAGGCCAG CTCGACGACA AGGAAGTCGA GCTCGACATC
GAGCAGCCGT CGGCCGGCAT GGACATCATG GCGCCGCCGG GGATGGAAGA GATGACCGAG
CAGATCCGCT CGATGTTCTC GAACCTCGGC AGCGGCAAGA AGCAGCGCCG CAAGGTGAAG
ATCAAGGAAG CGCTGAAGCT GCTGACCGAC GAGGAAGCGG CGAAGATGCT CAACGACGAG
GAAGTGAAGA CGAAGGCCGT GCAGAACGTC GAGCAGAACG GCATCGTGTT CCTCGACGAG
ATCGACAAGA TCACGTCGCG CAACAACGAA GGCAGCGGCG GCGAAGTGTC GCGCCAGGGC
GTGCAGCGCG ACCTGCTGCC GCTCGTCGAA GGCACGACGG TCAACACGAA GTACGGGATG
GTGAAGACCG ATCACATCCT GTTCATCGCG AGCGGCGCGT TCCACCTCGC GAAGCCGAGC
GACCTGATTC CCGAACTGCA GGGCCGCTTC CCGATCCGCG TCGAACTCGA CTCGCTGTCG
GTGAACGACT TCGAAGCGAT CCTCGTCGCG ACCGACGCCA GCCTCGTCAA GCAGTACCAG
GCGCTGCTCG CGACCGAAGA CGTGCAGCTC GAATTCGCCG ACGACGGCAT CCGCCGTCTC
GCGGAGATCG CTTATTCGGT CAACGAGAAG ACCGAGAACA TCGGTGCGCG CCGGCTTTAC
ACGGTGATCG AGAAACTGCT CGAGGAAGTG TCGTTCTCGG CCGGCAACCA TGCAGGCGAG
CGCGTGACGA TCGACGCGAA GTATGTCGAT CGCGCACTCG GCGAAGTGTC GCAGGACGAA
GACCTGTCGC GCTACGTGCT GTAA
 
Protein sequence
MSTMTPAEIV SELDKHIIGQ AKAKKAVAVA LRNRWRRQQV ADPLRQEITP KNILMIGPTG 
VGKTEIARRL AKLADAPFIK IEATKFTEVG YVGRDVDSIV RDLIEISVKQ TRETEMRKVR
SKATDQAEDR ILDILLPQPR AVGFGGNAEH ANDDNNATRQ TFRKRLREGQ LDDKEVELDI
EQPSAGMDIM APPGMEEMTE QIRSMFSNLG SGKKQRRKVK IKEALKLLTD EEAAKMLNDE
EVKTKAVQNV EQNGIVFLDE IDKITSRNNE GSGGEVSRQG VQRDLLPLVE GTTVNTKYGM
VKTDHILFIA SGAFHLAKPS DLIPELQGRF PIRVELDSLS VNDFEAILVA TDASLVKQYQ
ALLATEDVQL EFADDGIRRL AEIAYSVNEK TENIGARRLY TVIEKLLEEV SFSAGNHAGE
RVTIDAKYVD RALGEVSQDE DLSRYVL