| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5964 |
|---|
| Symbol | |
|---|
| ID | 3751195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 3093607 |
|---|
| End bp | 3094596 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637764283 |
|---|
| Product | lipopolysaccharide heptosyltransferase II |
|---|
| Protein accession | YP_370202 |
|---|
| Protein GI | 78067433 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.262349 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGC CACTTTTTGC GCTGCTGAAG AAAAACCATC CCCGCATCGC GATCGATGCC
GTCGCACCCT CGTGGGTCGC GCCCGTGCTC GAACGGATGC CCGAGATCCA CGATGTCTAC
GCGACCGATC TCGCGCACGG CAAGCTGCAG TTGCTGCGCC GCTGGCAACT CGCGAGCGAT
CTGCGCGACG TCGGCTACGA CGCGGCGTAC GTGCTGCCGA ATTCGCTGAA ATCCGCGGTG
ATCCCGTGGC TCGCGAACAT CCCGCTGCGG GTCGGCTACA CGGGCGAGCA CCGCTACGGG
CTGCTGAACG TGCGGCACGC GAACCCCGAC AAGTCGGGCG AGCGCCCGCC GATGACGACG
CACTACGCGG CGCTCGCGTA CGCGCCGGGC GCGAAGCTGC CCGAGTCGAT GAAGACGCTG
CCCGCGCCGC GCCTCGACGC CGATCTCAAC GAGACGGCGC GCGTGTCCGC GCGTTTCAAT
CTCGATACAC GCAAGCCGCT CGTCGTGTTC TGCCCCGGCG CGGAATACGG CCCGGCCAAG
CGCTGGCCGC CCGAACACTT CGCGTCGCTC GCCACCATCG TCCATCAGTC GTTCCCGTAC
ACGCAGATCG TCGCGCTCGG TTCGCAGAAG GATGCCGCGG CTGCGCAGGC GATCGCCGAC
CACGCACCGA ACGTGCGCAA CCTGTGCGGG CAGACGTCGC TGTCGGAGGC CTGCGCACTG
ATCGCGCGCG CGAACGCGGT GGTCACCAAC GATTCGGGGC TGATGCACGT TGCCGCCGCG
CTACGCCGGC CGCTCGTCGC GCTGTACGGA TCGACCGATC CGCGCCACAC CCCTCCGCTG
TCGGACCTGG CGAAGGTACA ATGGCTTCAT CTCGAATGCA GTCCCTGCTT CGAACGCGAG
TGCCCGCTCG GCCACCTGAA GTGCCTGCGC GAACTCGGTC CCGAGCAGGT ATTCGGCGAT
TTGCGCGGCA TGCTCGTCGG GCAACGCTGA
|
|---|
| Protein sequence | MAQPLFALLK KNHPRIAIDA VAPSWVAPVL ERMPEIHDVY ATDLAHGKLQ LLRRWQLASD
LRDVGYDAAY VLPNSLKSAV IPWLANIPLR VGYTGEHRYG LLNVRHANPD KSGERPPMTT
HYAALAYAPG AKLPESMKTL PAPRLDADLN ETARVSARFN LDTRKPLVVF CPGAEYGPAK
RWPPEHFASL ATIVHQSFPY TQIVALGSQK DAAAAQAIAD HAPNVRNLCG QTSLSEACAL
IARANAVVTN DSGLMHVAAA LRRPLVALYG STDPRHTPPL SDLAKVQWLH LECSPCFERE
CPLGHLKCLR ELGPEQVFGD LRGMLVGQR
|
|---|
| |