Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A5855 |
Symbol | |
ID | 3751086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 2972226 |
End bp | 2974454 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637764174 |
Product | isocitrate dehydrogenase (NADP+) |
Protein accession | YP_370093 |
Protein GI | 78067324 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0781482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.186883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACTT CGCCCAAGAT CATCTACACC CTCACTGACG AAGCGCCCGC GCTCGCGACC TATTCGCTGC TGCCGATCGT CAAGGCCTTC ACGCGCTCGT CCGGCGTCGC CGTCGAAACG CGCGACATCT CGCTCGCCGG CCGCATCATC GCGGCATTCG CAGACGTCCT GCAGCCCGAG CAGAAGGGTT CCGACGATCT GGCCGAACTG GGCCAGCTCA CGCTGAAGCC GGAAGCGAAC ATCATCAAGC TGCCGAACAT CAGCGCATCG GTGCCGCAGC TGAAGGCCGC GATCGCCGAA CTGCAGGCGC AGGGCTTCCA GCTGCCGGCC TATCCGGAAG ATCCGTCGAC GGACGAAGAG AAGGCGGTCA AGGCCCGCTA CGACAAGATC AAGGGCAGCG CGGTGAACCC GGTGCTGCGC GAAGGCAACT CCGACCGCCG CGCGCCGCTG TCGGTCAAGA ATTACGCACG CAAGCATCCG CACAAGATGG GCGCGTGGAA GGCCACGTCG AAGGCGCACG TTGCGCACAT GAGCGAAGGC GACTTCTACG GCAGCGAGAA GTCGGTGCTG ATCGCCGATG CCGGCAGCGT GAAGATCGAA CTCACGACGG CCGACGGCGC GAAGAAGGTA CTGAAGGAAA AGACGGCCGT GAAGGCCGGT GAAGTGATCG ACGCATCGGT GATGAGCCGC AATGCGCTGC GCAGCTTCAT CGACGCGCAG ATCGCGGATG CGAAGGCCCA GGACGTGCTG TTCTCGGTGC ACCTGAAGGC GACCATGATG AAGGTCTCGG ACCCGATCCT GTTCGGCCAC TTCGTGTCGG TGTTCTACCG CGATGTGCTC GCGAAGCACG CTGACGTGCT GGCGCAGGTC GGCTTCAACC CGAACAACGG GATCGGCGAC CTGTACGCAC GCCTGAAGGA CCTGCCGGCC GATACGCGCG AAGCGATCGA AGCCGACGTC AAGGCGGAAT ACGCCGTGCG TCCGCGCCTG GCGATGGTCA ACTCGGACAA GGGCATCACG AACCTGCACG TGCCGAGCGA CGTGATCGTC GACGCATCGA TGCCGGCGAT GATCCGCGAC TCGGGCGGCA TGTGGGGCCC GGACGGCCAG CTGTACGACG CGAAGGCCGT GATTCCGGAC CGTTGCTACG CAGGTGTCTA CCAGGCCGTG ATCGAGGACT GCAAGCAGCA TGGCGCGTTC GATCCGGTCA CGATGGGCAG CGTGCCGAAC GTCGGCCTGA TGGCGCAGGC GGCTGAAGAA TACGGTTCGC ACGACAAGAC GTTCCAGATC CCGGCAGACG GCGTCGTGCG CGTCACCGAC GAAGCGGGCA ACGTGCTGCT CGAGCATGCA GTGGAAGCGG GCGACATCTG GCGCATGTGC CAGACGAAGG ACGCACCGGT GCAGGACTGG GTCAAGCTCG CGGTCAACCG CGCACGCGCG ACCGGCGCAC CGGCCGTGTT CTGGCTCGAT CCGGCGCGCG CGCACGACGC GCAGATCATC GCGAAGGTCG AGCGTTACCT GAAGGATCAC GACACGAACG GCCTCGACAT CCGCGTGATG ACGCCGGTCG ACGCGACGCG TTTCTCGCTC GAGCGCATCC GTGCGGGCAA GGACACGATC TCGGTCACCG GCAACGTCCT GCGCGACTAC CTGACCGACC TGTTCCCGAT CATGGAACTC GGCACCAGCG CGAAGATGCT GTCGATCGTG CCGCTGATGG CCGGCGGCGG GATGTTCGAA ACGGGTGCGG GCGGTTCGGC GCCGAAGCAC GTGCAGCAGT TCGTCGAGGA AGGCTTCCTG CGCTGGGATT CGCTCGGCGA ATTCCTCGCG CTGGCCGCGT CGCTCGAACA CCTTGGCAAT GCCTACCAGA ACCCGAAGGC GGTCGTGCTC GCGAAGACGC TCGACCAGGC GACCGGCAAG TTCCTGGACG AGAACAAGTC GCCGGCGCGC AAGGTCGGCG GCCTCGACAA CCGCGGCAGC CACTTCTACC TGTGCCTGTA CTGGGCGCAG GCGCTGGCCG AGCAGACCGA GGACGCAGCG CTGAAGGCGC AGTTCGAAGG TGTGGCGAAG GCGCTGTCCG ACAGCGAAGC GCGCATCCTG GAAGAACTGG CGGCCGCGCA GGGCAAGGCG CAGGCGATCG GCGGCTACTA CCGTCCGAAC GTTGACCTGA CGAGCCAGGC CATGCGCCCG AGCGCGACGC TGAACGGCAT CGTCGACGCG GTCGCCTGA
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Protein sequence | MSTSPKIIYT LTDEAPALAT YSLLPIVKAF TRSSGVAVET RDISLAGRII AAFADVLQPE QKGSDDLAEL GQLTLKPEAN IIKLPNISAS VPQLKAAIAE LQAQGFQLPA YPEDPSTDEE KAVKARYDKI KGSAVNPVLR EGNSDRRAPL SVKNYARKHP HKMGAWKATS KAHVAHMSEG DFYGSEKSVL IADAGSVKIE LTTADGAKKV LKEKTAVKAG EVIDASVMSR NALRSFIDAQ IADAKAQDVL FSVHLKATMM KVSDPILFGH FVSVFYRDVL AKHADVLAQV GFNPNNGIGD LYARLKDLPA DTREAIEADV KAEYAVRPRL AMVNSDKGIT NLHVPSDVIV DASMPAMIRD SGGMWGPDGQ LYDAKAVIPD RCYAGVYQAV IEDCKQHGAF DPVTMGSVPN VGLMAQAAEE YGSHDKTFQI PADGVVRVTD EAGNVLLEHA VEAGDIWRMC QTKDAPVQDW VKLAVNRARA TGAPAVFWLD PARAHDAQII AKVERYLKDH DTNGLDIRVM TPVDATRFSL ERIRAGKDTI SVTGNVLRDY LTDLFPIMEL GTSAKMLSIV PLMAGGGMFE TGAGGSAPKH VQQFVEEGFL RWDSLGEFLA LAASLEHLGN AYQNPKAVVL AKTLDQATGK FLDENKSPAR KVGGLDNRGS HFYLCLYWAQ ALAEQTEDAA LKAQFEGVAK ALSDSEARIL EELAAAQGKA QAIGGYYRPN VDLTSQAMRP SATLNGIVDA VA
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