Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A5763 |
Symbol | |
ID | 3750993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 2873629 |
End bp | 2875908 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637764081 |
Product | lysine decarboxylase |
Protein accession | YP_370001 |
Protein GI | 78067232 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.318981 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTC GTTTCCCCGT CGTCATCATC GACGAAGATT TCCGCTCCGA GAACATTTCG GGCTCCGGCA TCCGGGCGTT GGCCGAAGCG ATCGAGAAGG AGGGCGTCGA AGTCCTCGGT CTCACGAGCT ACGGTGATCT GACGTCGTTC GCGCAGCAGT CGAGCCGCGC GTCGTGCTTC ATCCTGTCGA TCGACGACGA CGAACTCATG CTCGGCGAGA CCGGCTCGGA CGGCGAACTG CCCGAGCTCG CGACCGCGAT CATCGAGCTG CGCGCGTTCG TCACCGAAGT GCGCCGCCGC AACGCGGACA TCCCGATCTT CCTGTACGGC GAGACGCGCA CGTCGCGCCA CCTGCCGAAC GACATCCTGC GCGAGCTGCA CGGCTTCATC CACATGTTCG AGGACACGCC GGAGTTCGTC GCGCGCCACA TCATCCGCGA GGCGAAGGTC TATCTCGACT CGCTCGCGCC GCCGTTCTTC AAGGAACTCG TCAAGTACGC GGACGAAGGC TCGTACTCGT GGCACTGCCC GGGCCACTCG GGCGGCGTCG CGTTCCTGAA GAACCCGCTC GGCCAGATGT TCCACCAGTT CTTCGGCGAG AACATGCTGC GCGCGGACGT CTGCAATGCA GTGGACGAAC TCGGCCAGCT GCTCGATCAC ACGGGCCCGG TCGCGGCGTC CGAGCGCAAT GCGGCGCGCA TCTTCAGCGC GGACCACCTG TTCTTCGTGA CCAACGGCAC GTCGACGTCG AACAAGATCG TCTGGCATGC GACGGTCGCC CCGGGCGACA TCGTGCTGGT CGACCGCAAC TGCCACAAGT CGATCCTGCA CGCGATCACG ATGACGGGCG CGATCCCCGT GTTCCTCACG CCGACGCGCA ACCACTTCGG CATCATCGGG CCGATCCCGC GCGACGAATT CAAGCCGGAG AACATCCGCA AGAAGATCGA GGCGAACCCG TTCGCACGTG AAGCGATGCG CGAGAATCCG GACCTGAAGC CGCGCATCCT GACGATCACG CAGAGCACGT ACGACGGCGT CGTCTACAAC GTCGAGATGA TCAAGGACCT GCTCGGCGAC CTGCTCGACA CGCTGCACTT CGACGAAGCA TGGCTGCCGC ATGCGACGTT CCACGACTTC TACCGCGACA TGCACGCGAT CGGCGACGGC CGTCCGCGCA CCGGCGCGCT CGTGTTCGCG ACGCACTCGA CGCACAAGCT GCTCGCGGGC ATCTCGCAGG CATCGCAGAT CGTCGTGCAG GATTCGGAGA ACCGCACGTT CGACAAGCAC CGCTTCAACG AGGCGTACCT GATGCACACG TCGACGAGCC CGCAGTACGC GATCATCGCG TCGTGCGACG TCGCGGCCGC AATGATGGAG CCGCCGGGCG GCACCGCGCT GGTCGAGGAA TCGATCGCCG AGGCGATCGA CTTCCGCCGC GCGATGCGCA AGGTCGACGC CGAATACGGC GACGACTGGT TCTTCAGCGT GTGGGGCCCG GACAACCTGT CGGAAGAAGG CATCGGTTCG CGCGAAGACT GGATGCTGAA GCCGAACGAC CACTGGCACG GCTTCGGCCC GCTGGCGGAA GGCTTCAACA TGCTCGACCC GATCAAGGCG ACGATCATCA CGCCGGGGCT CGACGTCGAC GGCGAGTTCG GCGAGACCGG CATTCCGGCC GCGATCGTCA CGAAGTACCT GGCCGAGCAC GGGATCATCG TCGAGAAGAC CGGCCTGTAC TCGTTCTTCA TCATGTTCAC GATCGGCATC ACGAAGGGCC GCTGGAACTC GATGGTGACC GAGCTGCAGC AGTTCAAGGA CGACTACGAC AACAACCAGC CGCTGTGGCG CGTGCTGCCG GAATTCGTCG CGCAGCATCC GCGCTACGAG CGTGTCGGCC TGCGCGACCT GTGCACGCAG ATCCACGACG TGTACCGCGC GAACGACATC GCCCGCCTGA CGACGGAGAT GTACCTGTCG GACATGGAAC CGGCGATGAA GCCGTCGGAC GCGTTCGCGA AGCTCGCGCA CCGCAAGATC GACCGCGTGC CGCTCGACGA GCTCGAAGGC CGCGTGACGA GCATCCTGCT CACGCCGTAC CCGCCGGGCA TTCCGCTGCT GATCCCGGGC GAGCGCTTCA ACAAGACGAT CGTGAACTAC CTGCGGTTCG CGCGCGACTT CAACGAGCGT TTCCCGGGCT TCCACACCGA CATCCACGGC CTCGTCGCGG AAGAGGTGAA CGGCCGCGTC GAGTACTTCG TCGACTGCGT GCGCGACTGA
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Protein sequence | MKFRFPVVII DEDFRSENIS GSGIRALAEA IEKEGVEVLG LTSYGDLTSF AQQSSRASCF ILSIDDDELM LGETGSDGEL PELATAIIEL RAFVTEVRRR NADIPIFLYG ETRTSRHLPN DILRELHGFI HMFEDTPEFV ARHIIREAKV YLDSLAPPFF KELVKYADEG SYSWHCPGHS GGVAFLKNPL GQMFHQFFGE NMLRADVCNA VDELGQLLDH TGPVAASERN AARIFSADHL FFVTNGTSTS NKIVWHATVA PGDIVLVDRN CHKSILHAIT MTGAIPVFLT PTRNHFGIIG PIPRDEFKPE NIRKKIEANP FAREAMRENP DLKPRILTIT QSTYDGVVYN VEMIKDLLGD LLDTLHFDEA WLPHATFHDF YRDMHAIGDG RPRTGALVFA THSTHKLLAG ISQASQIVVQ DSENRTFDKH RFNEAYLMHT STSPQYAIIA SCDVAAAMME PPGGTALVEE SIAEAIDFRR AMRKVDAEYG DDWFFSVWGP DNLSEEGIGS REDWMLKPND HWHGFGPLAE GFNMLDPIKA TIITPGLDVD GEFGETGIPA AIVTKYLAEH GIIVEKTGLY SFFIMFTIGI TKGRWNSMVT ELQQFKDDYD NNQPLWRVLP EFVAQHPRYE RVGLRDLCTQ IHDVYRANDI ARLTTEMYLS DMEPAMKPSD AFAKLAHRKI DRVPLDELEG RVTSILLTPY PPGIPLLIPG ERFNKTIVNY LRFARDFNER FPGFHTDIHG LVAEEVNGRV EYFVDCVRD
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