Gene Bcep18194_A5420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A5420 
Symbol 
ID3750639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp2488454 
End bp2489707 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID637763727 
ProductLolC/E family lipoprotein releasing system, transmembrane protein 
Protein accessionYP_369658 
Protein GI78066889 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID[TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACTTC CGTACGAATG GCAGATCGGC TGGCGCTACA CGCGCGCCGG CAAACGCACG 
ACCGGTAACG GCTTCATTTC CTTCATCGCG CTCGTGTCGA TGCTCGGGAT CGCGCTCGGC
GTCGCGGCGC TGATCGTCGT GCTGTCGGTG ATGAACGGCT TCCAGAAGGA AGTGCGCGAC
CGCATGCTGT CGGTGCTCGC GCACGTCGAG GTGTTCTCGC CGACGGGGTC GATGCCCGAC
TGGCAACTGA CCGCGCAGGA AGCACGCCGC AATCCGTCGG TAATCGGCGC GGCGCCGTAC
GTCGATGCGC AGGCGTTGCT TACCCGCCAG GACGCGGTGA GCGGCGTGAT GCTGCGCGGC
GTCGAACCGA CGCTCGAGCC GCAGGTGTCG GACATCGGCA AGGACATGAA GGCGGGCCAG
CTCGGCGCGC TCGTGCCGGG CCAGTTCGGC ATCGTGCTCG GCGATGCGCT CGCGGGCAAC
CTCGGCGTGA CGGTCGGCGA CAAGGTCACG CTGGTCGCGC CGGAAGGGTC GATCACGCCG
GCCGGCATGA TGCCGCGGCT GAAGCAGTTC ACGGTCGTCG GCGTGTTCGA GTCCGGGCAC
TATGAATACG ACAGCACGCT CGCGATGATC AACATCCGCG ACGCCGAGGC GCTGTTCCGG
ATGTCCGCGC CGACCGGCGT GCGGCTGCGG CTGAAGGACA TGCAGAAGGC GCCGGACGTG
GCGGTCGAGC TGTCGCATAC GCTGTCGGGC AGCCTGTACA TCCGCGACTG GACCCAGCAG
AACAAGACGT GGTTCTCGGC CGTGCAGATC GAGAAGCGGA TGATGTTCAT CATCCTCACG
CTGATCATCG CGGTGGCCGC GTTCAACCTC GTGTCGTCGC TCGTGATGAC CGTGACCAAC
AAGCAGGCCG ACATCGCGAT CCTGCGCACG CTCGGCGCGC AGCCGGGATC GATCATGAAG
ATCTTCGTCG TGCAGGGCGT GACGATCGGT TTCGTCGGCA CGGCGTCGGG CGTCGCGCTC
GGCTGCCTGA TCGCGTGGAG CATCCCGTGG CTGATCCCGA TGATCGAGCA CCTGTTCGGC
GTGCAGTTCC TGCCGCCGTC CGTGTACTTC ATCAGCGAAC TGCCGTCGGA ACTCGTCGCG
AGCGACGTGA TCCGGATCGG GCTGATCGCA TTCGCGCTGT CGGCGATCGC GACGCTCTAT
CCGAGCTGGC GCGGCGCGAA GGTGAAGCCG GCGGAGGCGC TCCGTTATGA ATGA
 
Protein sequence
MKLPYEWQIG WRYTRAGKRT TGNGFISFIA LVSMLGIALG VAALIVVLSV MNGFQKEVRD 
RMLSVLAHVE VFSPTGSMPD WQLTAQEARR NPSVIGAAPY VDAQALLTRQ DAVSGVMLRG
VEPTLEPQVS DIGKDMKAGQ LGALVPGQFG IVLGDALAGN LGVTVGDKVT LVAPEGSITP
AGMMPRLKQF TVVGVFESGH YEYDSTLAMI NIRDAEALFR MSAPTGVRLR LKDMQKAPDV
AVELSHTLSG SLYIRDWTQQ NKTWFSAVQI EKRMMFIILT LIIAVAAFNL VSSLVMTVTN
KQADIAILRT LGAQPGSIMK IFVVQGVTIG FVGTASGVAL GCLIAWSIPW LIPMIEHLFG
VQFLPPSVYF ISELPSELVA SDVIRIGLIA FALSAIATLY PSWRGAKVKP AEALRYE