Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A5338 |
Symbol | |
ID | 3750549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | + |
Start bp | 2396812 |
End bp | 2398044 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637763637 |
Product | succinyldiaminopimelate transaminase |
Protein accession | YP_369576 |
Protein GI | 78066807 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.271745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCTT CGCCCGTGAA CCCTCGACTC GACTCGCTCC AGCCCTATCC CTTCGAAAAG CTGCGCGCCC TGTTCAAGGA CGTGACGCCC TCCGGCGCCC TCAAACCGAT CAGCTTCGGC ATCGGCGAGC CCAAACATGC CACCCCGGCG CTGATCCGCG ACGCCGTGGT CGCAGCGCTC GACGGTCTCG CGTCGTACCC GGCCACCGCC GGCTCGGACG CGCTGCGCAC GTCGATCGCG CACTGGCTCG AGCGCCGCTA CGGGCTGCCG GCCATCGATC CGGCCACGCA GGTGCTGCCC GTGTCGGGGT CGCGCGAGGC GCTGTTCTCG CTTGCGCAGA CGGTGATCGA CGCACGCCCG TCCGAACAGG GCGAGAAGGC GATCGTACTC TGTCCGAATC CTTTCTATCA AATTTACGAA GGCGCCGCGC TGCTGGCCGG TGCCGAACCC TATTTCGCGA ACAGCGACCC GGCCCGCAAC TTCGCGTGCG ACTACGCGTC CGTGCCGGAC GCGGTCTGGG CGCGCACGCA ACTGCTGTAC GTCTGCTCGC CGGGCAACCC GACGGGCGCC GTGCTGACGC TCGACGACTG GCGCGAGTTG TTCGCGCTGT CCGACCGCCA CGGTTTCGTG ATCGCGTCCG ACGAGTGCTA TTCGGAAATC TATTTCGACG AAGCGGCGCC GCCGCTCGGC GGCCTCGAGG CCGCGCACCG CCTCGGCCGC GGCTTCGAGC GGCTCGTGAT GCTGTCGAGC CTGTCGAAGC GCTCGAACGT GCCGGGCATG CGCTCGGGCT TCGTCGCCGG CGACGCGGCG CTGCTGAAGA AATTCCTGCT GTACCGCACG TACCACGGCG CGGCGCTGTC GCCGGTCTGG CAGCACGCGA GCATCGCCGC GTGGAACGAC GAGGCGCACG TGCGCGAGAA CCGCGCGCTG TACCTGCAGA AGTTCAATAC CGTCACGCCG CTGCTGGCCG ACGTGATCGA CGTGAAGCTG CCCGACGCGG CGTTCTACCT GTGGGCCAAC GTGTCGCGCA CCGGGCTGTC GGACACCGAG TTCGCCCGCC GCCTGTACGC CGACTATAAT GTGACGGTTC TGCCCGGCTC GTACCTGGCG CGCGACGCGC ACGGCACGAA TCCGGGCCGC GATTTCATCC GGATCGCGCT CGTCGCGGGC ACCCCCGAAT GCGTCGAGGG CGCGCAACGC ATCGTCGATT TCTGCCGCTC TCTCGCGCGG TAA
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Protein sequence | MAASPVNPRL DSLQPYPFEK LRALFKDVTP SGALKPISFG IGEPKHATPA LIRDAVVAAL DGLASYPATA GSDALRTSIA HWLERRYGLP AIDPATQVLP VSGSREALFS LAQTVIDARP SEQGEKAIVL CPNPFYQIYE GAALLAGAEP YFANSDPARN FACDYASVPD AVWARTQLLY VCSPGNPTGA VLTLDDWREL FALSDRHGFV IASDECYSEI YFDEAAPPLG GLEAAHRLGR GFERLVMLSS LSKRSNVPGM RSGFVAGDAA LLKKFLLYRT YHGAALSPVW QHASIAAWND EAHVRENRAL YLQKFNTVTP LLADVIDVKL PDAAFYLWAN VSRTGLSDTE FARRLYADYN VTVLPGSYLA RDAHGTNPGR DFIRIALVAG TPECVEGAQR IVDFCRSLAR
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