| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5094 |
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| Symbol | |
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| ID | 3750302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | - |
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| Start bp | 2133248 |
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| End bp | 2134456 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637763390 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_369332 |
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| Protein GI | 78066563 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.760184 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTT CAAGTTCGCA GAATGCCCAG CCGGGCACAC CAAATCGCGA AGATTATAGC
CCAAGCGATC GGCCCGCCGA CGCTGCCTCG GGGGATTCCC TCGATGACGA TCTGACCGGC
GACGCAATGC AGCCGCCCGT CGTGCCGTCC GCAGCGGTCG ATGAAGCGCC GCGCGTCGTC
GAAGTGCCGC TGTCGCTCGC GGGCGAACGC CTCGACAAGG CGCTCGCCCA ACTGTTCCCC
GAATTCTCGC GCAGCCGCCT GCAGAGCTGG ATCGAGGCGC AGCGCGTGCT CGTCGACGGC
GCGCCCGCGA AGATCCGCCA GCCGGTGCCG CTCGGCGCGA AGATCCAGCT CGTCCCCGAC
CTGCTCCCCG AGCAGCTCGC CTTTACGCCG GAGCCGGTGC CGCTCGACGT GATCTACGAG
GACGACGCGC TCGTCGTCAT CAACAAGCCG GCCGGCCTCG TCGTGCATCC GGCCGCCGGC
AACTGGAGCG GCACGATCCT CAACGGGCTG CTGCACCGCT ATGGCGACGC TGCGGCCGGC
CTGCCGCGCG CAGGGATCGT CCACCGGCTC GACAAGGAAA CGTCGGGCCT GATGGTGGTG
GCGCGCACGC TGGCCGCGCA GACGGACCTC GTGCGCCAGT TGCAGGCCCG CACTGTGAAG
CGCCGCTATT TTGCGCTGGT GTGGGGCACG ATGCCCGAGG AAGGCACGAT CGATGCGCCG
ATCGGCCGCG ATCCGCGAGA ACGCACGCGC ATGGCCGTCG TCACGGGCGC ATCGGGCAAG
CCCGCGCGCA CGCATTTCCG CACGGTTGAC ACATGCCTGT GGCAACGTCA GCCGGTTTCG
GCGATTCAGT GCGATCTCGA GACCGGTCGC ACGCACCAGA TCCGCGTGCA CTGCGCGCAT
GCCGGGCATC CGCTGCTCGG CGATCCCGTG TACGGGCGTG CGCGCGGCAA GCGCTCGGTC
ACGCCGCTGC CGGACGGGTT CGCGCGACAG GCGCTGCATG CATGGCGGCT CGGTCTCGTG
CATCCGGTCA CGGGCAAGGC GATGCAATGG CGCTGCCCGC TGCCGGACGA CATGAACACG
CTGGTCGCGG CGCTCGGCTT CGGGCAAGGC GACGAGGAAT TCGGCGACGA TGACGGTGTC
TACGACGATG ACGATTTCGG CGGCGAGTAT CACGATGACG AGCCGTACCT GGACGATGAG
GAGGAGTGA
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| Protein sequence | MTRSSSQNAQ PGTPNREDYS PSDRPADAAS GDSLDDDLTG DAMQPPVVPS AAVDEAPRVV
EVPLSLAGER LDKALAQLFP EFSRSRLQSW IEAQRVLVDG APAKIRQPVP LGAKIQLVPD
LLPEQLAFTP EPVPLDVIYE DDALVVINKP AGLVVHPAAG NWSGTILNGL LHRYGDAAAG
LPRAGIVHRL DKETSGLMVV ARTLAAQTDL VRQLQARTVK RRYFALVWGT MPEEGTIDAP
IGRDPRERTR MAVVTGASGK PARTHFRTVD TCLWQRQPVS AIQCDLETGR THQIRVHCAH
AGHPLLGDPV YGRARGKRSV TPLPDGFARQ ALHAWRLGLV HPVTGKAMQW RCPLPDDMNT
LVAALGFGQG DEEFGDDDGV YDDDDFGGEY HDDEPYLDDE EE
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