| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A5072 |
|---|
| Symbol | |
|---|
| ID | 3750280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 2110923 |
|---|
| End bp | 2111726 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637763368 |
|---|
| Product | putative ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_369310 |
|---|
| Protein GI | 78066541 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0390] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | [TIGR00245] conserved hypothetical protein TIGR00245 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.362537 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCCCA CACTGCAGGA CCTGAGCCTC GTCGACGTCG GCATCGCCGC CGCGCTCGTC
GCGGTCAACG GCGCGATCTC GATGGCCCTG TCGCTCGGCC TCGGCCGCAA GCTCGCGCTC
GCGGCCGTGC GCACCGTCGT GCAGTTGCTC GCGATCGGCT ACGTGCTCGG CTGGGTATTC
GGCCATCCTC ACTGGTACGT CGTGCTGCCG CTCACCGCAC TGATGACGCT GATCGCCGGT
TTCGCCGGCG CGGGGCGCGG CAAGCGCACG TATCGCGGCC AGCGCATCGA CAGCATTGCG
TCGATCTGGT TCAGCAGCTG GTTCGTCGCG GCGGTCGGCC TGTTCGTCGT GATCCGCATC
CATCCGTGGT ACGCACCGCA ATACGCGATT CCGATCCTCG GGATGATTCT CGGCAATACG
CTCACGGGCG TGTCGCTCGG CGTCGAACGG ATGATGGAAG AACTCACGGC GCGCCGCGAC
CGTGTCGAGA CCGCACTCGC GCTCGGCGCG ACGCGCTGGG AAGCCGCGCA GGACGCCGCA
CGCCAGGCCG TGCGCGCCGG CATGCTGCCG ACGCTGAACC AGATGGCCGT CGTCGGCGTC
GTGAGCCTGC CGGGGATGAT GACGGGCCAG GTGCTGGCCG GCCAATCGCC GCTGCAGGCC
GTGCGTTACC AGATCGTGAT CATGTTCCTG ATTGCCGCGG CCTCCGCGCT CGGCACGGTC
GGCGCGGTGC TGATGACCTA TCGCCGGCTG TTCTCGCCCG ATCACCGCTT TCTCGCAGCG
CGGCTCGAAG AACGCGCGCA CTGA
|
|---|
| Protein sequence | MSPTLQDLSL VDVGIAAALV AVNGAISMAL SLGLGRKLAL AAVRTVVQLL AIGYVLGWVF
GHPHWYVVLP LTALMTLIAG FAGAGRGKRT YRGQRIDSIA SIWFSSWFVA AVGLFVVIRI
HPWYAPQYAI PILGMILGNT LTGVSLGVER MMEELTARRD RVETALALGA TRWEAAQDAA
RQAVRAGMLP TLNQMAVVGV VSLPGMMTGQ VLAGQSPLQA VRYQIVIMFL IAAASALGTV
GAVLMTYRRL FSPDHRFLAA RLEERAH
|
|---|
| |