Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A4960 |
Symbol | |
ID | 3750168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 1985076 |
End bp | 1986710 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637763256 |
Product | Na+/solute symporter |
Protein accession | YP_369198 |
Protein GI | 78066429 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.319543 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.144233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGTG TACTACTCGC GTCGCTCATC GCGATCGAAG CATTGCCAGC AGTCGCGGCC CAACCTGGAT CGCTCACGCA CGGCCATAAT CCGGTCGCAA TCGGCATGTT CTTGTTGTTT GTGGCATCGA CACTCCTGAT CACCCGCTGG GCGGCCCGCA AAAACCACAG CGTCGCTGAT CACTATGCCG CCGGAGGCAA GATTACTGCG TTCCAGAACG GATGGGCGAT TGCCGGTGAC TACATGTCGG CGGCATCTCT GCTCGGCATC TCGGCGCTCG TGTTCACAAG CGGTTACGAT GGGCTGATCT ATTCCATCGG ATTTCTCGCG AGCTGGCCCA TCATCCTGTT CCTGATCGCC GAGCCGTTGC GCAACCTCGG CAAATACACA CTGGCAGACG TGGTGTCCTA CCGGCTCCAG CAACGGCCAA TCCGGGCCTT TGCGGCTTCG AGCTCGATCG TCATCGTGCT GCTGTATCTC GTGTCGCAGA TGGTTGGCGC GGGCAAGCTG GTCGAATTGC TGTTCGGCCT GAATTACACC ATTGCGGTAC TGATCGTCGG CCTGCTGATG GTCGTCTACG TATTCTTCGG CGGAATGCTG GCAACGACGT GGATTCAGAT CGTCAAGGCC GTCCTGCTAC TCGCCGGCGC AGCATTCATG GCACTCATGG TGCTGAGTCA TTTCGGCTTC AGCCTGAACG CCCTTTTCAC GCAGGCGGTT CTCGTGCATT CGAAGCACGA TGCCATCATG CGCCCAGGCG GGCTTGTCTC GGATCCGGTT TCCGCTGTAT CGCTCGGCCT CGCGCTGATC TTCGGCACGG CCGGGCTGCC CCATATCCTG ATGCGATTCT TCACGGTCGG CAACGTCAAG GCTGCGCGCA AGAGCATTCT TTACGCCACG GGTATCGTCG GCGTCGGCTA CGCATTGATC ATCATCATTG GCTTCGGGAC AATCGCACTC GTTGCGTCAA ATCCGGAGTA TCACAATTCG TCAGGTTCCG TGATCGGCGG CGTGAACATG GTAGCGATCC ATCTCGCGCA CGCGGTGGGG GGAAACGTGT TCCTCGGATT CATCTGCGCA GTCGCATTCT CGACCATTCT TGCAGTGGTA GCCGGCCTGA CCCTGGCTGG ATCGTCCGCG ATCTCGCATG ACCTGTACGC GAATGTCCTG CGCCGTGGCA ATGCGTCTGA TCGCGATGAA ATGCGCGTGG CCCGTATAAC CACGCTCGTC CTGGGCGTCC TGGCAGTGCT CCTCGGTATC GCCTTCGAGA AGCAAAACAT CGCCTTCATT GTCAGTCTTA CGTTTTCGAT TGCGGCCAGC TCAAACTTCC CGGTCCTACT GCTCTCGATC TATTGGCGCG GCCTGACCAC GCGCGGCGCT GTCATCGGTG GCATGCTCGG TCTCATCACC GCCGTTGTGC TGACCGTATT GAGTCCGACA GTATGGGTAC AGGTTCTTGG CCACGCGCAT GCTCTCTACC CGTACGAATA CCCCGCACTC TTTTCGATGG CTGTCGCGTT CGCCGGCATT GTCGTGATTT CCGTTGCGGA CAACTCGGCC CGGGCCCGAC AGGAGCGCGC ACGATTTGAC ACGCAGCTCG TCGAGTGCGA ATTGGGGGGG ACGCGGCACG GTTGA
|
Protein sequence | MKRVLLASLI AIEALPAVAA QPGSLTHGHN PVAIGMFLLF VASTLLITRW AARKNHSVAD HYAAGGKITA FQNGWAIAGD YMSAASLLGI SALVFTSGYD GLIYSIGFLA SWPIILFLIA EPLRNLGKYT LADVVSYRLQ QRPIRAFAAS SSIVIVLLYL VSQMVGAGKL VELLFGLNYT IAVLIVGLLM VVYVFFGGML ATTWIQIVKA VLLLAGAAFM ALMVLSHFGF SLNALFTQAV LVHSKHDAIM RPGGLVSDPV SAVSLGLALI FGTAGLPHIL MRFFTVGNVK AARKSILYAT GIVGVGYALI IIIGFGTIAL VASNPEYHNS SGSVIGGVNM VAIHLAHAVG GNVFLGFICA VAFSTILAVV AGLTLAGSSA ISHDLYANVL RRGNASDRDE MRVARITTLV LGVLAVLLGI AFEKQNIAFI VSLTFSIAAS SNFPVLLLSI YWRGLTTRGA VIGGMLGLIT AVVLTVLSPT VWVQVLGHAH ALYPYEYPAL FSMAVAFAGI VVISVADNSA RARQERARFD TQLVECELGG TRHG
|
| |