| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4888 |
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| Symbol | |
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| ID | 3750096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 1903011 |
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| End bp | 1904459 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637763185 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_369127 |
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| Protein GI | 78066358 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.595836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.509529 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCGAA TCGCCGTTGC CGCGGCGCTC GTCATGCTCG GCGCGTGCGC GAGCCGCGAC
GGGCTCACGC CGGCCGGCAC ATTGCGCGGC GCCGATACGC TTGCCGCATC GCGCAGCCTC
GCGCAGGTGC CGGCCGCCGA CTGGCCGGCT GCCGACTGGT GGCGCGCGCT GAACGATACG
CAACTGAGTG CGCTTATCGA CGAGGCGCTC GCCGGCAACC CCGATCTCGC GACCGCCGAT
GCGCGTGCAC GCGAAGCGCA GGCGCTGGTG ATCGAGGCAC AGGCCGCGCG GCTGCCGCAC
CTCGTCGGCC GCGGGAGCGC GAAGGCCGAG CGGCTGTCCG GCACCCAGTT TTCGTCAGGC
GAGGGCGGCG GCTTCTTCAG CCACACGCGC GAGATCACTC TCGGCCTGAG CTGGGATCTC
GATCTGTGGG GCAGCCGCCG CGCCGCATGG GAAGCCGCGC TCGGCGAAGC GCGCGCCGCG
CAAGTCGACG CGCAGGCCGC CCGCGTGCTG CTGTCGGTCA ACGTTGCGCG CGCCTACGTG
AATCTCGCAT ACGCATTCGA TCAGCAGGAC CTCGCGCGGG CCGAATACGA GCGCGCCGAC
GAAGCGCTCA CACTCACGCG CCAGCGCGTC ACGAAAGGCA TCGACAACGT CGCGCAGCAG
CGTCAGGCGG AAAGCGAAGT CGCGGCCGCG ACGCGCGAGC AGGCCCGCAC CGCGCAGGCG
GTCGACAGCG CGCGCATCGC GCTCGCGATC CTGCTCGGCG CCGGCCCCGA TCGCGGCCTC
GCACTGGTGC GGCCCGCGCC GCTGCCGGCC GCCGCGCTCG CGGTGCCGGC CGACCTGCCG
GCCGCGCTGC TCGGCCGGCG CGCCGACCTC GTCGCCGCGC GCTGGCGCGT CGAAGCGGCC
AGCCGCAACG TCGCGGCCGC TCGTGCGGAT TTCCTGCCGA ACGTCAGTCT CACCGCGCTG
ATCGGGCTCG CGACGCGTGG CGGCGCCTCG CTGTTCCAGG CCGCGTCGCG CACCTATAAC
GCCAGCCCGG CCGTGAGCCT GCCGATCTTC GACGGCGGCG AACGGCGCGG CGTGCTGCGC
AGGCGCGACG CGCAATACGA CCTCGCGGTC GCCGGCTACA ACAAGACGCT GATCGGTGCG
ATCGGCGAGG TGGCCGACGA TCTGCACCGG CTGCATTCGC TCGCCGTGCA GACGGATGCC
CAGCAGCGTG CGTTCGACTC CGCCACCGAT GCGTGGCGGC TCGCGGACGC GCGCTACCGG
GCCGGCGTCG GCAGCTACCT CGATGCGCTC GTCGTGCGCC AGCAACTGCT GGTCGCGAGC
CGCGAGGTTG CCGCGCTGCG CGCGCAGCGC GCGGACCAGT CGCTGCAGCT CGTCGCCGCG
CTCGGTGGCG GCTTCCGCGC CGAGCCGGAC GACGCCGCGC TTGCCGCCAC GCCTTCCCAA
CGTCCTTGA
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| Protein sequence | MSRIAVAAAL VMLGACASRD GLTPAGTLRG ADTLAASRSL AQVPAADWPA ADWWRALNDT
QLSALIDEAL AGNPDLATAD ARAREAQALV IEAQAARLPH LVGRGSAKAE RLSGTQFSSG
EGGGFFSHTR EITLGLSWDL DLWGSRRAAW EAALGEARAA QVDAQAARVL LSVNVARAYV
NLAYAFDQQD LARAEYERAD EALTLTRQRV TKGIDNVAQQ RQAESEVAAA TREQARTAQA
VDSARIALAI LLGAGPDRGL ALVRPAPLPA AALAVPADLP AALLGRRADL VAARWRVEAA
SRNVAAARAD FLPNVSLTAL IGLATRGGAS LFQAASRTYN ASPAVSLPIF DGGERRGVLR
RRDAQYDLAV AGYNKTLIGA IGEVADDLHR LHSLAVQTDA QQRAFDSATD AWRLADARYR
AGVGSYLDAL VVRQQLLVAS REVAALRAQR ADQSLQLVAA LGGGFRAEPD DAALAATPSQ
RP
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