Gene Bcep18194_A4845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A4845 
Symbol 
ID3750053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp1863248 
End bp1864414 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content66% 
IMG OID637763142 
ProductABC transporter, periplasmic ligand binding protein 
Protein accessionYP_369084 
Protein GI78066315 
COG category[R] General function prediction only 
COG ID[COG4134] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0226871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000145502 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAACGCCA CCCCGATCGC TCGCCGTGTC CGCCGGATCG CACTCGCGCT GGGCTTCACG 
CTGTCTGCCG CGGCCGCCGT TGCCGCGCCC GTCTCGCTGA ACATCGTCGA TGTCGCGGGC
AACCTGCAGC TCACGCAGAA GGCCATCGAA GCCTTCAGGG ACAAGAACCC GAACCTCGTG
TCGAACGTCA CGTTCACGAA CGCGCCTGCG CCGCAGTTGC CGGGCAAGAT CAAGGCGATG
CAGGCGGCGG GGCGCTCCGA CATCGACCTC GTGCTGACGG GCACCGACGC GTTGGCCGCC
GGCATCGAGC AGAACCTGTG GCAGAAGCTG CTGCCCGACG ACGCGACCGC GTTCCCCGGC
GTGCTCGACA AATACGCGCC CGGCCCGCGC AAGATGCAGG ATCTCGCGCA GGGCTACGGC
CTCGAAGTCA CCTACATGCC GGCCGGCCCG CTGCTCGAAT ACAACCCGGC GAAGGTCAGC
AACCCGCCGA AGACGCCCGA TCAGCTGCTC GCGTGGTGCA AGGCGCACCC GAACAAGCTG
ATCTATGCGC GCCCGGCGAA CTCGGGCCCC GGCCGCACGT TCCTGATGGG GCTGCCGTAC
GTGCTCGGCG ACAAGAATCC GCAGGATCCG ATCAACGGCT GGGACAAGAC CTGGGCGTTC
CTCAAGGCGC TGAACGACTG CGTGCCGTAC TACCCGGGCG GCACGTCGGC CGTGATGAAG
GAGCTTGGCG AAGGCACGCG CGACATGACC GTGACCGTCA CCGGCTGGGA TCTCAACCCG
CGCGCACTCG GCATCGTGCC GGCCGAATTC AGGATCCAGG CGTTCGACAA CATGACGTGG
GTGAACGACG CGCACTACAT GGTGATCCCG AAGGGCGTGC CGAAGGAAAA GCTCGACGTG
CTGTTCAAGC TGATGAACTT CCTGCTCGAA CCGGCGCAGC AGGCGATGAC CTACGACGAC
GGCTACTTCT ATCCGGGCCC GGCGGTGAAG GGCGTGACGC TGGAGATGGC GCCCGCGCAC
AGCCAGGAGG TGGTCCGCAA GTTCGGCCGC CCCGAGTACG CGAAGCTGCT TGCGGATCGT
CCGCACGTGC AGCCGCTCAG CGCGCAGGCG ATGGTCGCCG CGTTCCAGAA GTGGGATCGC
GAGATCGGTT CGCAGAAGTC GAAGTAA
 
Protein sequence
MNATPIARRV RRIALALGFT LSAAAAVAAP VSLNIVDVAG NLQLTQKAIE AFRDKNPNLV 
SNVTFTNAPA PQLPGKIKAM QAAGRSDIDL VLTGTDALAA GIEQNLWQKL LPDDATAFPG
VLDKYAPGPR KMQDLAQGYG LEVTYMPAGP LLEYNPAKVS NPPKTPDQLL AWCKAHPNKL
IYARPANSGP GRTFLMGLPY VLGDKNPQDP INGWDKTWAF LKALNDCVPY YPGGTSAVMK
ELGEGTRDMT VTVTGWDLNP RALGIVPAEF RIQAFDNMTW VNDAHYMVIP KGVPKEKLDV
LFKLMNFLLE PAQQAMTYDD GYFYPGPAVK GVTLEMAPAH SQEVVRKFGR PEYAKLLADR
PHVQPLSAQA MVAAFQKWDR EIGSQKSK