| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4682 |
|---|
| Symbol | |
|---|
| ID | 3749885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 1674605 |
|---|
| End bp | 1675642 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637762974 |
|---|
| Product | ABC sugar transporter, inner membrane subunit |
|---|
| Protein accession | YP_368921 |
|---|
| Protein GI | 78066152 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4158] Predicted ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.377068 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.145685 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAACC CGACCAAGCA GCGGAACCTC GCTTCCGCGA CGGCCCAGCC GGTGGCCACC
CGTACGCCGC TATTGCGCGG CGCCGATCAC CGCGCCCGCA TGCAATCGCT GATCCGCACC
GCCGGCATGC TGCCGGTGCT GCTGGTTCTG TGCATCGGCT TCGGTTTCCT GACCGACGGT
TTCTTCACGC TGCAGAACCT GTCGATCGTC ACGCAGCAGG CGTCGATCAA CATCGTGCTC
GCCGCCGGCA TGACCTTCGT GATCCTGACG GGCGGCATCG ACCTGTCGGT CGGCTCGGTG
CTCGCCGCCG CCGCCGTCGC GGCGCTGCTC GCGTCGACCA TCCCGGGCTG GGGCTGGCTC
GGCGTGCCGT TCGCGCTCAT CGTCGGCCTC GTGTTCGGCG CGATCAACGG CGGCCTGATC
TCGTTCCTGC GCCTGCCGCC GTTCATCGTC ACGCTCGGCG CGATGACGGC CGTACGCGGC
GTCGCGCGCC TGATCGGCAA CGACACGACC GTGTTCAATC CGCAATTGCC GTTCGCGTTC
ATCGGCAACG GCACGATCCT CGGCGTGCCT TGGCTCGTCG TGATCGCGTG CGCGGTGATC
GCGATTTCGT GGTTCATCCT GCGCCGCACG GTGCTCGGGA TGCGCATCTA TTCGGTTGGC
GGCAATCCGG AAGCCGCCCG CCTGTCGGGC ATCAACGTGC GGGCGATCCA GATGTTCGTG
TACGCGGCGT CGGGGCTGCT CGCCGGCCTC GGCGCGGTGA TGTCGGCCGC GCGGCTCTAT
GCGGCCAACG GCCTGCAGCT CGGCCAGTCG TACGAACTCG ACGCGATCGC CGCGGTGATC
CTCGGCGGCA CGAGCTTCGT CGGCGGCGTC GGTTCGATCG TCGGCACGCT GATCGGTGCG
CTGATCATCG CGGTGCTGAC GAACGGCCTC GTACTGCTCG GCGTATCCGA CATCTGGCAA
TACATCATCA AGGGGCTCGT GATCATCGGC GCGGTCGCGC TCGACCGCTA CCGCCAGCGC
GATTCGGCAC GTACCTGA
|
|---|
| Protein sequence | MINPTKQRNL ASATAQPVAT RTPLLRGADH RARMQSLIRT AGMLPVLLVL CIGFGFLTDG
FFTLQNLSIV TQQASINIVL AAGMTFVILT GGIDLSVGSV LAAAAVAALL ASTIPGWGWL
GVPFALIVGL VFGAINGGLI SFLRLPPFIV TLGAMTAVRG VARLIGNDTT VFNPQLPFAF
IGNGTILGVP WLVVIACAVI AISWFILRRT VLGMRIYSVG GNPEAARLSG INVRAIQMFV
YAASGLLAGL GAVMSAARLY AANGLQLGQS YELDAIAAVI LGGTSFVGGV GSIVGTLIGA
LIIAVLTNGL VLLGVSDIWQ YIIKGLVIIG AVALDRYRQR DSART
|
|---|
| |