| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4638 |
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| Symbol | |
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| ID | 3749841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 1619405 |
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| End bp | 1621171 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637762930 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_368877 |
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| Protein GI | 78066108 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.386925 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACAGATA TCCACGATAT TGAATCGTCC GCGCCTGCCG TGCAGGCAGC GCGTGCCGAC
GATGCACCGG AGCAGGGCGC TTCGGCCGAG GGTGGCGACG AGCGTCCCCG CCGCGGTCTG
CGGCGAGGCC CGCGCAGCCT GATCGCGCGG CGTCGCGCGG CGGCCAAGTC GAAGGGCGCC
GAAGGCGAGC CGCAGGGCGG CGAAGGCGCT GACGCGCAGC CGGCCGAAGC CGCCGAAGCG
CAGCAGCCGA CGCGTGCGCC GCGCAAGGAA GGTGCGGCCA AGGGTGCTCG CAAGCCGGCC
GCCAAGCGCG AAGGCGCGGC CAAGGCCCCG GGCGGCCAAG GCGGCCAGAG TCGTCGCAGC
AGCGCACCGA AGGCTGAAGG TGGTGCGGCA AAGGTGGAGG GCGATGCGTC CCAGGACGAA
CTGTTCGCCT ACGTGACGTC GCCGGCATTC GACGCGGACA ACTCCGCGGG CGGTAGCGGC
GTGCGTGCGC CGATGCTGCG CCGCGGTCGC AGCCAGCCGG CGAACAAGCG CGTGCTGTCG
CCGGACGACG ACGCGCCGAA GCTTCACAAG GTGCTGGCGG AAGCGGGCAT GGGCTCGCGC
CGCGAAATGG AAGAGCTGAT CGTCGCCGGC CGCGTGTCGG TGAACGGTGA GCCCGCGCAC
ATCGGCCAGC GCATCATGCC GACCGACCAG GTGCGGATCA ACGGCAAGCC GGTCAAGCGC
AAGCTGCCGA ACAAGCCGCC GCGCGTGCTG CTGTACCACA AGCCGACGGG CGAGATCGTC
AGCCATGCGG ATCCGGAAGG TCGTCCGTCG GTGTTCGACC GCCTGCCGCC GATGAAGACG
GCGAAATGGC TCGCGGTGGG GCGCCTCGAT TTCAATACCG AAGGTCTGCT GATGCTGACG
ACTTCGGGCG ACCTCGCAAA CCGCTTCATG CATCCGCGCT ACAGCGTCGA GCGCGAGTAC
GCGGTGCGCG TCGTCGGCGA ACTGGCCGAA GGCATGCGGC AGAAGCTGCT GCACGGCGTC
GAGCTCGATG ACGGCCCGGC GAACTTCCTG CGCATCCGCG ACGGCGGCGG CGAAGGCACG
AACCACTGGT ATCACGTTGC GCTGGCCGAA GGCCGCAACC GCGAAGTGCG CCGGATGTTC
GAGGCGGTCG GCCTGATGGT GAGCCGCCTG ATCCGTACGC GTCACGGCCC GATTCCGCTG
CCGCGCGGCC TGAAGCGCGG TCGCTGGGAG GAGCTCGACG ACACGCAGGT GCGCAAGCTG
ATGGCGACCG TCGGCCTGAA GGCGCCGTCC GAGGAGAAGG GCAAGCGCGG CGGTACCGGC
CAGGCCGAGC GTCGCCAGCC CGATCCGATG CAGACGTCGA TGGGCTTCAT CGGCCGTGAG
CCGGTGCTGA CGGCGCACGG GCAGCTGGAT CAGCCGCGTC GTGGCAGTGG TCGTCGCGGC
GGGCCGGGTC TGCCGGGTCT GAGCGGCTAC GGCAGCCTGC CGGTCGCGCC GTCGGGCTTT
GGCAATCGCG CTGGCGGCGG CCGGGATGGC AACCGTGCGG GCGGAGGCGG GCGCGACGGC
AATCGCGCCG GCGGTGGCCG TGGCGATGTC GACGGCAACC GCGCGTCGTA CGGCGCAGGC
CCCAAGCGTG ATGGCGCGGG CCCCAAGCGC GGCGGCAGCA AGGGCGGTAA TCGCAACCCG
AACGGCAATC GTGCCGAGGG CGCCGGTAAC AGCGGCGGCC CGCGCGGTGG TCAGCGTCCG
CAGCGCAGTC GCACGCGCAG CCGCTGA
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| Protein sequence | MTDIHDIESS APAVQAARAD DAPEQGASAE GGDERPRRGL RRGPRSLIAR RRAAAKSKGA
EGEPQGGEGA DAQPAEAAEA QQPTRAPRKE GAAKGARKPA AKREGAAKAP GGQGGQSRRS
SAPKAEGGAA KVEGDASQDE LFAYVTSPAF DADNSAGGSG VRAPMLRRGR SQPANKRVLS
PDDDAPKLHK VLAEAGMGSR REMEELIVAG RVSVNGEPAH IGQRIMPTDQ VRINGKPVKR
KLPNKPPRVL LYHKPTGEIV SHADPEGRPS VFDRLPPMKT AKWLAVGRLD FNTEGLLMLT
TSGDLANRFM HPRYSVEREY AVRVVGELAE GMRQKLLHGV ELDDGPANFL RIRDGGGEGT
NHWYHVALAE GRNREVRRMF EAVGLMVSRL IRTRHGPIPL PRGLKRGRWE ELDDTQVRKL
MATVGLKAPS EEKGKRGGTG QAERRQPDPM QTSMGFIGRE PVLTAHGQLD QPRRGSGRRG
GPGLPGLSGY GSLPVAPSGF GNRAGGGRDG NRAGGGGRDG NRAGGGRGDV DGNRASYGAG
PKRDGAGPKR GGSKGGNRNP NGNRAEGAGN SGGPRGGQRP QRSRTRSR
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