| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4525 |
|---|
| Symbol | |
|---|
| ID | 3749726 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 1489617 |
|---|
| End bp | 1491932 |
|---|
| Gene Length | 2316 bp |
|---|
| Protein Length | 771 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637762816 |
|---|
| Product | cellulose synthase regulator protein |
|---|
| Protein accession | YP_368765 |
|---|
| Protein GI | 78065996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.00483718 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGG CCGTGTCGCT GCTCGTCCTC TCGGCCGCGA TGGTCGGCGC TTTTCACGCC
GCCGCGCTGT CGGCCGCACC GATGCCGGCC GTGCCGGCTG CCGCTGCCGC CGCGTCCGGC
GCTGCGCCGG CGCCGGTGCT CGCGGCTGCG CCCGCGGCGG CCAGCACGGC CGCAGCCGGC
CTGCCGGCGA CGACGGTGCG CCTGCCGTTC GCGTCGCTCG GCGCGTTCGA TCCGCTGCGC
CTGCGCGGCG CCGACGACGC ACGCACGATC AACGCGGGCG TGCGGCTCGA CCGCGTGGTC
ACCGGCGCGC GGCTGCGCCT GACTTACGCG TATTCGCCGT CGCTGGTGTT CCCGATGTCG
CACCTGAAGG TGTCGGTGAA CGGCGAGGTC ATCGCGACCG TCCCGTTCGA CGCCGCACAG
GCGGGCCGCA CGGTCACGCA AGAGATACCG ATCGATCCGC GCTACTTCTC GGATTTCAAC
CAGATCGGCC TGCGCCTGAT CGCGCACTAC ACGCTCGACC ATTGCGAGGA TCCGGCCAAC
TCGGCGCTGT GGGCCGACGT GAGCCCGAAG AGCGAGCTGA TCCTCGATGA ATCGCCCGTC
CGCCTGCCGA ACGATCTCGC GCTGCTGCCC GCGCCGTTCT TCGACCGGCG CGACAACGGT
CGCGTGCGGC TGCCGTTCGT GCTGCCGGCG TCGCCCGATT CGGCGACGCT GCGCAGCGCG
GGCGTGCTCG CGTCGTGGTT CGGCGCGCTG GCCGACTACC GGCATGCGCG CTTCCCGGTG
TCGTCCGGGC TGCCCGCCGA CGACCAGGCA GTCGTGATCG GCACGGCCGC CACGCTGCCG
GCCGGCCTCG CGCTGCCGTC GATCAACGGG CCGCTGCTCG CGGTGGCCGA CAACCCGGCC
GCGCCGGGGC GCAAGCTGCT CGTCGTCACG GGCCGCACGG CGGCCGAGGT CGACGATGCG
GTCGCGACGC TCGTGCTGGG CCGCGTGGCG CTGTCGGGGC CGTCGGCGAC GGTCGCGCAC
GTCGATCTCG GCGCACCGCG CAAGCCGTAC GACGCGCCGC GCTGGCTGCC GGTGAACCGG
CCGATCGCGT TCCGCGAGCT GGTATCCGAC ACGCGCGAAC TCGAAGTGCG CGGCACGTCG
CCCGACGCGA TCCGCCTGAA CCTGCGCGTG CCGTCCGATC TGCATTCGTG GAACGGCGCG
GGTGTGCCGA TTACGCTGCG CTACCGCTAC ACGGCGCCGA CGGTGCAGGA CAACTCGACG
CTCGCCGTCG AGATCAACGA CCAGCTCGTG AAGTCGTACC GGCTCGGGCC GGCCCATGCC
GAGGATGCGC ACGGCCGCAT GCAGCTGCCG CTGCTGTCGG TGCCGGAAGG GCGCGTGACG
AGCGACGTCG ACATCCCGGC GTTCCGGGTC GGCAGCGGCA ACCAGCTGCA GTTCCGCTTC
ACGCTCGATT CGCAGAAGAC GGGCCTGTGC TCGAGCACGG CGACCGAGCC GCAGCGCGCG
GCGATCGATC CCGATTCGAC GATCGACTTC TCGCACTTCG TCCATTACGC GCAGTTGCCG
AACCTCGCGT TCTTCGCGAA CAGCGGCTTC CCGTTCACGC GCTTCGCCGA CCTGTCGCAG
ACGGCCGTCG TGATGCCTGA CCGGCCGTCG CCGCAGGAGC TCGAGGCCTA CCTGACGATG
CTCGGCCACA TGGGCGAATG GACCGGCTTC CCGGCGCTGC GCGTGCAGGT TGCGCGGCCA
GGCGATGTCG CCGCGCTGTC GGGCAGCAAG GATCTCCTCG TGATCGACGG CTCGCCCACA
TCGCCGCTGC TCGCGCACTG GCGCTCGGCC TTGCCGCTCG TGATCGGCGA GCAGGGCAGC
GCGGGCGGCG AAGGCGCCGC GCGCGTCGCG TTCTCGGTGA AGGAGCGCTG GCGCAACGGC
GTCGGCCTGA CCGAAGGCGG CGCACATATC GAGCAGACGG GCTCGCTCGC GGCGCTCGCC
GGGTTCGAGC TGCCGGGCAG CCGGGGGCGC AGCGTCGTCG CGCTGACGGC GACCGACCAG
CCGCGCCTCG GCGATCTGCT CAACGTGTTC GAGAACGCCG GGCTCGTGTC GCAGCTGCAA
GGCGACCTTG CGCTGGTGCG GCCGGGGCAG GTCGACAGCC TGCGCGTCGG CGAGCCTTAC
GTGGTCGGCT TCGTGCCGTG GTATGCGCGC GTGTGGACGC ATGCGGCGCG GCATCCGGTC
GTGCTGGGCG CGGTCGGCGT CGTGGCGGGG CTGCTGCTCG CGCTCGGCGT GTTCAGCGTG
CTGCAGAGAA TCGCCGCGCG TCGACGGGGG ATGTAA
|
|---|
| Protein sequence | MKPAVSLLVL SAAMVGAFHA AALSAAPMPA VPAAAAAASG AAPAPVLAAA PAAASTAAAG
LPATTVRLPF ASLGAFDPLR LRGADDARTI NAGVRLDRVV TGARLRLTYA YSPSLVFPMS
HLKVSVNGEV IATVPFDAAQ AGRTVTQEIP IDPRYFSDFN QIGLRLIAHY TLDHCEDPAN
SALWADVSPK SELILDESPV RLPNDLALLP APFFDRRDNG RVRLPFVLPA SPDSATLRSA
GVLASWFGAL ADYRHARFPV SSGLPADDQA VVIGTAATLP AGLALPSING PLLAVADNPA
APGRKLLVVT GRTAAEVDDA VATLVLGRVA LSGPSATVAH VDLGAPRKPY DAPRWLPVNR
PIAFRELVSD TRELEVRGTS PDAIRLNLRV PSDLHSWNGA GVPITLRYRY TAPTVQDNST
LAVEINDQLV KSYRLGPAHA EDAHGRMQLP LLSVPEGRVT SDVDIPAFRV GSGNQLQFRF
TLDSQKTGLC SSTATEPQRA AIDPDSTIDF SHFVHYAQLP NLAFFANSGF PFTRFADLSQ
TAVVMPDRPS PQELEAYLTM LGHMGEWTGF PALRVQVARP GDVAALSGSK DLLVIDGSPT
SPLLAHWRSA LPLVIGEQGS AGGEGAARVA FSVKERWRNG VGLTEGGAHI EQTGSLAALA
GFELPGSRGR SVVALTATDQ PRLGDLLNVF ENAGLVSQLQ GDLALVRPGQ VDSLRVGEPY
VVGFVPWYAR VWTHAARHPV VLGAVGVVAG LLLALGVFSV LQRIAARRRG M
|
|---|
| |