Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A4223 |
Symbol | |
ID | 3749418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 1157497 |
End bp | 1160658 |
Gene Length | 3162 bp |
Protein Length | 1053 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637762509 |
Product | ribonuclease E |
Protein accession | YP_368464 |
Protein GI | 78065695 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0187486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCA TGCTGTTCAA TGCGACGCAG CAGGAGGAGC TGCGCGTCGC CATCGTCGAC GGGCAGAAGC TCATCGACAT CGACATCGAG ACAGCCGGGC GCGAACAGCG CAAAGGCAAT ATCTACAAAG GTGTCATCAC CCGTATCGAG CCGTCGCTCG AAGCGTGCTT CGTCAACTAC GGCGAAGACC GCCACGGCTT CCTGCCGTTC AAGGAAGTTG CCCGCCAGTA CTTCAAGGAA GGCATCGACA TGCGCTCCGC GCGCATCCAG GATGCCCTGC GCGAAGGCCA GGAGCTGATC GTCCAGGTCG AGAAGGAAGA ACGCGGCAAC AAGGGCGCTG CCCTCACCAC GTTCATCTCG CTCGCCGGCC GCTATCTGGT GCTGATGCCG AACAATCCGC GCGGCGGCGG CGTGTCGCGC CGGATCGAAG GCGACGAGCG TCAGGAACTG CGCGAGACGA TGGCGCAACT GCAGATCCCG GACGGCATGA GCATGATCGC CCGTACCGCG GGCATCGGCC GCAGCGCCGA GGAACTGCAG TGGGACCTGA ACTACCTGCT GCAACTGTGG CGCGCGATCG AAGCGGCGTC GCAAAGCGGC AATGCCGGCC AGCCGATGCT GATCTACCTG GAATCGAGCC TCGTGATCCG CGCGATCCGG GACTATTTCC AGCCCGATAT CGGCGAAATC CTGATCGATA CGAACGAAAT CCACGATCAG GCCCGCGCAT TCATGGATAT CGTGATGCCG GACAACGTCG CGAAGGTGAA GCGCTACCAC GACGACGTGC CGCTGTTCTC CCGCTTCCAG ATCGAACACC AGATCGAGAC CGCGTACTCG CGCACGGTGC CGCTGCCGTC GGGCGGCGCG ATCGTGATCG ACCATACCGA AGCGCTCGTC GCGATCGACG TGAACTCGGC GCGTGCCACC AAGGGCGCGG ACATCGAGGA AACGGCGACC CGCACGAACC TCGAAGCAGC CGACGAAGTC GCCCGCCAGC TCCGCCTTCG CGACCTCGGC GGACTGATCG TGATCGATTT CATCGACATG GAATCGGCGA AGAGCCAGCG CGAAGTCGAG CAGCGCCTGA AAGATGCGCT CAAGCATGAC CGCGCGCGCG TCCAGATGGG CAAGATCTCC CGCTTCGGCC TGATGGAACT GTCGCGCCAG CGCCTGCGTC CGGCCCTGTC GGAAGGCAGC CACGTGACCT GCCCGCGTTG TAACGGCACC GGCCACATCC GCGATACCGA ATCGTCCGCG CTGCAGGTCC TGCGGATCAT TCAGGAAGAA GCGATGAAGG AAAACACCGC GGCGATCCAC TGCCAGGTGC CGGTCGAGGT GACCGCCTTC CTGCTCAACG AAAAGCGTCA GGAAATCAAC AAGATCGAGT CGCGCTTCAA GGTCGGCATC GTGCTGATCC CGAACAAGCA CCTCGATACG CCGCACTACA AGCTCGAGCG CCTGCGCCAC GACGACGCAC GTCTCGACGA CCCGCGCGCG TCCTGGAAGA TGGCCGAGGA AGCAGCCCGC GAACTCGAGT CGGAAACCGG CTACAGCAAG CGCGCGGCGG AAGTGAAGCC GAAGCAGGAA GCCGCGGTCA AGGGCATCAC GCCCGAGCGT CCGGCCCCGA GCCCGGCACC GCAGCGCCCG GTCGAACCCG TTGCAGCGCC CACGCCTGTG GCGCCGGCCA GCGGCGGCTT CATCGGCTGG CTGAAGGGCC TGTTCGGCGT GTCCCCGGCG CCCGCCCCCG CACCGGTTGC TCCGGCACCG GCGAAGGAGC AGGCAGCCCG TCCGGCGCGC GGCGAACGCA CCGAGAAGTC CGAGCAGCGT GGCGAACGCG GCGGCGATCG CAACCGCAAT CGTCGTGGCG GCGCCCAGCA GGCACAGGGC GGTCGCGACC AGGCTGTGGC AGGCCGTGGC CAGCCGCAAC GCCAGGAACG CGAAGGCAAG GAAGTGCGCG AACCGCGTGA GGCTCGTGAG CCGCGTGAAG GCCGCGAACC GCGTGAAAGC CGTGAGCCGC GCGAACCGCG CGAGAACCGC GAAGGTCGCG AGGGCCGTGG CCCGCGTGAA GGTCGCGAGC CGCGTGAAGG CCGTGAGCCG CGCGAACCGC GTGAGAACCG CGAACCGCGC GAGCGTATCG AGCAGCCGGA AGGCGTCGAA GCAGCCGGTC GTGGCGAGCG CCAGGAACGC GGCGAACGTC GCGAGCGCGG TGAGCGCCGC AAGCCGACCC AGCATGCAGC AACGCTGGAA ACCGTCAACC GTGGCGAAGC GCATCCGGAA CCGGAAGCCG ACAAGGCCCT CGCAGAAGCC CTGCCCGACG CCGAGCTGGC AGCCGACGCG GAAGCCGGCG CGCGTGATGG CGAGGAACGT CGCCGTCGCC GTCGCGGCCG CCGCGGCGGT CGTCGTGAGC GCGAGGAAGA CGGCGCAGTC GTCGACCACG CCGAGCAAGG CGCAGAGGGT GAAGTTGCGG TGCACGCTGT GACGCCGGAA GCACCGGCTG CTGCCGAACC GGCCCACACG GCCGCACCGG CAGTCGCCGT GGCAGCCGCC GCGGCAAGTG CCGTCGTCGT CGAAGCAGTG GTCGAGCACC ATGCCGAACC GGCAGCACCG GCCACTGTCG AGCCGCAGCC GGCGCCGGTA CACGTCGAAG CAGTGGCGGT CGAAGCAGCC GTTGTCGCCC AGGCAGCAGA ACCGGCACCG GTCGCACCGG CCGTCGCGAC TGAAGCCGGC CCGGCGCCGG TCGCGGTTTC GCCGACCGAC GCGTTCGAAG TGCCGGCAGC ACCTGTCGCT GTCGAGGCGC CGCAACCGGC ACCCGTCGAG CAAGCTGCAC CGGCCGTGAC GACCGAAGCC GCTCCGGTGG CTGTCGAGCC GGTCCATGTC GAAGCAGCAC CGGTCGAAGC CGTGGCAGCA CCGGCACCGG CACCCGCACC GGCACCGGCC CCCGCTCCGG CCCAACCGGC AGCCGCGCCC GCTTCGGCGA GCCTGGATAC CGTGCTGGAG CAGGCTGGTC TCGTCTGGGT GAACACCGAC GCCGGCAAGT TCGCCGCTGC GCAGGAAGCC GCGTCGCGCC TCCCGCGTCC GGCTCGCGTG CAGCGCGAAC GCAAGGCGCT GCCGCCGGTC GATACGGCCC CGATGCAGCA GGTCGAAACG ACGCATCACT GA
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Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGVITRIE PSLEACFVNY GEDRHGFLPF KEVARQYFKE GIDMRSARIQ DALREGQELI VQVEKEERGN KGAALTTFIS LAGRYLVLMP NNPRGGGVSR RIEGDERQEL RETMAQLQIP DGMSMIARTA GIGRSAEELQ WDLNYLLQLW RAIEAASQSG NAGQPMLIYL ESSLVIRAIR DYFQPDIGEI LIDTNEIHDQ ARAFMDIVMP DNVAKVKRYH DDVPLFSRFQ IEHQIETAYS RTVPLPSGGA IVIDHTEALV AIDVNSARAT KGADIEETAT RTNLEAADEV ARQLRLRDLG GLIVIDFIDM ESAKSQREVE QRLKDALKHD RARVQMGKIS RFGLMELSRQ RLRPALSEGS HVTCPRCNGT GHIRDTESSA LQVLRIIQEE AMKENTAAIH CQVPVEVTAF LLNEKRQEIN KIESRFKVGI VLIPNKHLDT PHYKLERLRH DDARLDDPRA SWKMAEEAAR ELESETGYSK RAAEVKPKQE AAVKGITPER PAPSPAPQRP VEPVAAPTPV APASGGFIGW LKGLFGVSPA PAPAPVAPAP AKEQAARPAR GERTEKSEQR GERGGDRNRN RRGGAQQAQG GRDQAVAGRG QPQRQEREGK EVREPREARE PREGREPRES REPREPRENR EGREGRGPRE GREPREGREP REPRENREPR ERIEQPEGVE AAGRGERQER GERRERGERR KPTQHAATLE TVNRGEAHPE PEADKALAEA LPDAELAADA EAGARDGEER RRRRRGRRGG RREREEDGAV VDHAEQGAEG EVAVHAVTPE APAAAEPAHT AAPAVAVAAA AASAVVVEAV VEHHAEPAAP ATVEPQPAPV HVEAVAVEAA VVAQAAEPAP VAPAVATEAG PAPVAVSPTD AFEVPAAPVA VEAPQPAPVE QAAPAVTTEA APVAVEPVHV EAAPVEAVAA PAPAPAPAPA PAPAQPAAAP ASASLDTVLE QAGLVWVNTD AGKFAAAQEA ASRLPRPARV QRERKALPPV DTAPMQQVET THH
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