| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A4072 |
|---|
| Symbol | |
|---|
| ID | 3749258 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 999543 |
|---|
| End bp | 1000481 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637762350 |
|---|
| Product | ABC sugar transporter, inner membrane subunit |
|---|
| Protein accession | YP_368313 |
|---|
| Protein GI | 78065544 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0117098 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCCC CTCTTAGCGG AAACGGATCC GGCGCTGCCG CCGCACGGCG TACGTCGCCG
ATGTCGGCCT TCGCCGATCG CTGGATTCCG AAGCTCGTGC TTGCGCCGAG CGTCGCGATC
GCCGTGGTGT TCATCTACGG CTTCATCCTG ATTACCGGCT ATCTGTCGCT GACCAATTCG
CGGCTGTTGC CGAACTACGA ATTCGACGGC TTCGGCCGTT ACACGGACCT GTTCCAGAAC
GACGTGTGGT GGACTTCCGC CGCGAACCTC GGCTGGTTCG GGATTCCGTT CATCGCGATC
TGCGTCGCGC TCGGGCTGTT CCTCGCGATC CTGCTCGACC AGCGGATTCG CAACGAAGGC
GCGCTGCGCG CGGTCTTCCT GTACCCGATG GCGCTGTCGT TCATCGTCAC CGGCACCGCG
TGGCAGTGGA TCCTGAACCC GGGCCTCGGC CTCGAGAAGG TGATGCACGA CTGGGGCTGG
ACGAGCTTCT CGTTCGACTG GCTCGGCGAT CCGGACAAGG CGATCTTCTG CGTGGTGATC
GCGGCCGTGT GGCAGTCGAC CGGCTTCGTG ATGGCGCTGT TCCTCGCAGG GCTGCGCGGT
GTCGATGCGG AGATCTTCAA GGCCGCGCAG GTGGACGGCG CGACGCTGCC GACCATCTAC
CGCAAGATCG TGATCCCGAG CATGCGCCCG GTGTTCTTCT CGGTGCTGCT GATCCTCTGC
CACATCACGA TCAAGACCTT CGACCTGGTC GTCGCGCTGA CGGCGGGCGG CCCGGGCACG
TCGTCGTCGC TGCCGGCCAT GTTCATGTAC ACGTTTTCGT TCAACCGCGG CCAGCTCGGG
CTCGGCGCGG CGTCCTCGGT GATGATGCTC GCGACCGTGG TCGCAGTGCT GGTGCCGCTG
ATGTATATGG AATCGAGGAG CACCCGCAAT GCAGCCTAA
|
|---|
| Protein sequence | MAAPLSGNGS GAAAARRTSP MSAFADRWIP KLVLAPSVAI AVVFIYGFIL ITGYLSLTNS
RLLPNYEFDG FGRYTDLFQN DVWWTSAANL GWFGIPFIAI CVALGLFLAI LLDQRIRNEG
ALRAVFLYPM ALSFIVTGTA WQWILNPGLG LEKVMHDWGW TSFSFDWLGD PDKAIFCVVI
AAVWQSTGFV MALFLAGLRG VDAEIFKAAQ VDGATLPTIY RKIVIPSMRP VFFSVLLILC
HITIKTFDLV VALTAGGPGT SSSLPAMFMY TFSFNRGQLG LGAASSVMML ATVVAVLVPL
MYMESRSTRN AA
|
|---|
| |