| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3976 |
|---|
| Symbol | |
|---|
| ID | 3749161 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | - |
|---|
| Start bp | 899897 |
|---|
| End bp | 901204 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637762255 |
|---|
| Product | ABC polysaccharide/polyol phosphate export pump, ATPase subunit |
|---|
| Protein accession | YP_368219 |
|---|
| Protein GI | 78065450 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.421912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAACTC GCGAGCCTGA ACCTACAAGC CAAACGGAAC AGCTGCTCGT CAACGTCGAG
CACCTCTCCA AGTGCTTCCG TATCTACGAC AAACCGGCAG ACCGGCTGCG GCACTCGCTC
GCGACTCGCA TCAAGCTCCC CGGGAGCAAT TCCCGGCAAT ACGGTCGTGA TTTTTGGGCG
CTGCACGACG TCTCGTTCCC CGTCCGGCGG GGCGAGACCA TCGGAATCAT TGGCAGAAAC
GGTTCCGGAA AGTCGACGTT GCTGCAAATC ATTGCCGGCA CGCTGTCGCC GAGCGACGGC
TCGGTCACGG TCAACGGCCG AATCTCCGCA CTGCTGGAAC TCGGCGCCGG GTTCAATCCG
GAATTCAGCG GCCGCGAGAA CGTGATGCTG TCTGCACGGA TCATGGGCAT CACGTCGGAA
GAAATCCGCG CGCGTTTTCA CGAAATCGAA GCGTTCGCCG ACATCGGCGA ATTCATCGAC
CAGCCCGTCA AGACCTACTC GTCGGGCATG TACGTCCGGC TCGCATTCGC GGTAGCCATT
CACGTCTCCC CCGATATCCT GGTGGTCGAC GAGGCACTTG CGGTCGGCGA TACCGCGTTT
CAGACCAAAT GCCTGACGCG GATCCGGAAG ATGCAGAAGG AAGGCGTCAC GATCCTGCTG
GTCACACACT CCACCAACAC CCTCGTCGAG TACTGCGACC GGGCCATCTA CCTGAAGCGG
GGCCGGCTGG TAAAGGACGG TCCGTGCCGC GACGTGGTCA AGCTCTATGC GAACGACCTC
GTCGACGAAG AAGGCGGGAG CGCGATCGAC ATCGAGGTGC CGACACAGCA CACCGACACC
GCTTCCCCCG CCAGCTCGGC GGTAAGCGAT GCCATGACGG CCTTGTCGGA CCGGACGTCG
ATTCTCGACG TGAAGATCGA GGATGCGAAC GGCAAGGAAC GCACGACCTT CTCGTTCAAT
GAAGCGTTCC GCGTCGTCGT ATCGATCAGC GTGTCCGAGC CGAACCCGAA GCCTTGCTTC
GGACTTCAGA TCAAAAGCAT CGACGATATC GTGCTGTGGA GCGCGACCAC CCAGCACATG
AATATTGCGC TGCCGCCCCT GTCCGCCGGA AAGTACCAGT TCACCTGGAA GATGCGCGCG
AGCTTCTCTG GCAACCGCTA TGTGCTGGCG GTCGGCGTCG GCGATATCGC CTCCGGCGAA
TACAAGCGGC ACGCGCGCCT GCCCTATGGT GGCCACATCG ACGTGCTTCC GGAAAACAAC
AGTGGATCGG GGTGGCTCGC GCCGTGTCCG GTGTTCGAGT TCGAATGA
|
|---|
| Protein sequence | MQTREPEPTS QTEQLLVNVE HLSKCFRIYD KPADRLRHSL ATRIKLPGSN SRQYGRDFWA
LHDVSFPVRR GETIGIIGRN GSGKSTLLQI IAGTLSPSDG SVTVNGRISA LLELGAGFNP
EFSGRENVML SARIMGITSE EIRARFHEIE AFADIGEFID QPVKTYSSGM YVRLAFAVAI
HVSPDILVVD EALAVGDTAF QTKCLTRIRK MQKEGVTILL VTHSTNTLVE YCDRAIYLKR
GRLVKDGPCR DVVKLYANDL VDEEGGSAID IEVPTQHTDT ASPASSAVSD AMTALSDRTS
ILDVKIEDAN GKERTTFSFN EAFRVVVSIS VSEPNPKPCF GLQIKSIDDI VLWSATTQHM
NIALPPLSAG KYQFTWKMRA SFSGNRYVLA VGVGDIASGE YKRHARLPYG GHIDVLPENN
SGSGWLAPCP VFEFE
|
|---|
| |