| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3953 |
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| Symbol | |
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| ID | 3749138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | - |
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| Start bp | 875295 |
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| End bp | 876761 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637762232 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_368196 |
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| Protein GI | 78065427 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0268403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.112791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG CGTCGTTCCA GGGAGACAGC GTCCGTGCCC GGATGCGCCC CGCCGCCTGC
GCGGCCATCC TCGCGTGCGC GTCATTCTCG AGCGGCGCGG CGTTCGCCGA CGTGCCGGTC
GACGCACAGC CCGAAGCACC CGAGGCCGAC CTCGCGATCC AGGCGAAGCC GACCAACATG
TGGACCGGCA TCTGGACCCG CCAGAACCTG CTCGGCGACA TGGGCGGCAT CCGCCCGTGG
CTCGGCAAGT ACGGCGCGAC GCTGCAGATC ACCGAAACCA GCGAATACCT TGCGAACCTG
CGCGGCGGCC TGAACCGCGG CGGCGCGTAC GACGGGCTGA CGACGGCGAC CTTGACGGTC
GACACGCAGA AGGCGATCGG CCTGCCCGGC GGCACGTTCA ACGTCAGCGC GCTGCAGATC
CACGGCACCA ACCTGAGTAC GCGGAACCTC GGCACGCTCA ACACCGCGAG CGGCATCGAG
GCACAGGGCA CGACGCGCCT GTGGGAGCTG TGGTACCAGC AGTCGTTCCT CGACAAGCGT
GTCGACGTGA AGATCGGCCA GCAGAGCCTG GACCAGGAAT TCATGGTCAG CACGTATGCG
AACACGTTCG TCAACACGAT GTTCGGCTGG CCCGCGCTGC CGTCGTACGA CCTGCCGAAC
GGCGGCCCGG CGTATCCGCT CGCGGGCCTC GGCGTGCGCG TACGCGCGCA GATCACGCCG
AAGCTCACCG CACTCGCGGG CGTGTTCGAC GGCGATCCGC TCGGCAACAA CCCGAGCAAC
CTCAGCGGCA CCAACTTCAA CCTGCACAAC GGTGCGCTTT ATATCGGCGA ACTGCAGTAC
GCGCTGAACC AGCCGTCCGA CGGTGAAATG GACACCGGCC GCTCGAACGG GCTGCCGGGC
ACCTACAAGA TCGGCGTCTG GTATCACAAC GGCCGCTTCG CGGACCAGAA CGTGGGCACC
GACGGGCTGT CGCTCTCGGA TCCCGCATCG AACGGCAACG CGCAGCAGCG GCACGGCAAC
TACAGCTTCT ACGCGGTGGC CGACCAGATG ATCTGGCGCC CCGACCCGAC CGGCCCGCGA
AGCCTCGGCG TGTTCGCCCG CGTGATGGGC GCGCCGGGTG ACCGCAACCT GGTGAGCCTG
TCGGCCAATG CGGGGATCGT GCTGAAGGCG CCGTTCGAGG GCCGCGACAA CGACAGCGTC
GGCCTCGGCG TCACGTACAT CCAGGTCGGC AACCACGTGA CCGACCTCGA CCAGACCGCG
CAGTCGTTCG CGACCGGCCC GTACGGCGTA CGCACCCGCG AGACGACCCT CGAAGCGACC
TACCAGTACC AGGTCAACCC GTGGTGGATC GTCCAGGCCG ACGCGCAGTA CACGTTCAAC
GCCGGTGCCG GCCAGAACCC GAGCGACGCG ACCCAGCCGC TGCGCAACAC GTTCGTGATC
GGTGCACGTA CGACGATCAC GTTCTGA
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| Protein sequence | MKFASFQGDS VRARMRPAAC AAILACASFS SGAAFADVPV DAQPEAPEAD LAIQAKPTNM
WTGIWTRQNL LGDMGGIRPW LGKYGATLQI TETSEYLANL RGGLNRGGAY DGLTTATLTV
DTQKAIGLPG GTFNVSALQI HGTNLSTRNL GTLNTASGIE AQGTTRLWEL WYQQSFLDKR
VDVKIGQQSL DQEFMVSTYA NTFVNTMFGW PALPSYDLPN GGPAYPLAGL GVRVRAQITP
KLTALAGVFD GDPLGNNPSN LSGTNFNLHN GALYIGELQY ALNQPSDGEM DTGRSNGLPG
TYKIGVWYHN GRFADQNVGT DGLSLSDPAS NGNAQQRHGN YSFYAVADQM IWRPDPTGPR
SLGVFARVMG APGDRNLVSL SANAGIVLKA PFEGRDNDSV GLGVTYIQVG NHVTDLDQTA
QSFATGPYGV RTRETTLEAT YQYQVNPWWI VQADAQYTFN AGAGQNPSDA TQPLRNTFVI
GARTTITF
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