Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3935 |
Symbol | |
ID | 3749120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 855248 |
End bp | 856687 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637762214 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_368178 |
Protein GI | 78065409 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000976381 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACCCACG GGATTCACGG CGAGAAGCGC TGGTACGCGC TGATCGTCCT CTGCCTCGGC GTGCTGATGA TCGTGCTCGA CAGCACGATC GTGAACGTTG CACTGCCGTC GATCAGCACC GACCTCCACT TCACCGAGAC GGCCCTCGTG TGGGTCGTCA ACGCGTACCT GCTGACGTTC GGCGGCTGCC TGCTGCTCGG CGGACGGCTC GGCGACCTGT ACGGCCAGCG GCGCATGTTC CTCGCCGGCC TCGTCGTCTT CACGCTCGCA TCGCTTGCGT GCGGCCTCGC GCAGTCGCAG ACGATGCTGA TCGCCGCGCG CGCGGTGCAG GGGATCGGCG GTGCAGTCGT ATCGGCCGTC GCGCTGTCGC TGATCATGAA TCTCTTCACC GAGCCCGGCG AGCGCGCCCG CGCGATGGGC GTGTACGGCT TCGTCTGCGC CGGCGGCGGC AGCATCGGCG TGCTGCTCGG CGGGCTGCTG ACGAGCTCGC TGTCGTGGCA CTGGATCTTC CTCGTCAACC TGCCGATCGG CATCGCGGTC TATGCGATGT GCGTCGCGCT GCTGCCGCGC CTGCGCGCGC CGGCCGGCAC CGCGCGGCTC GACGTCGCGG GTGCGATCAC CGTCACTGCA TCGCTGATGC TGGCCGTCTA CGGGATCGTC GGCGGCAACG AGGCCGGCTG GCTGTCGACG CAGACCGTTT CACTGATCGG CGCGGCCGTC GTGCTGCTCG CGCTGTTCAT CGCGATCGAG GCGCGCGCCG CGCATCCGCT GATGCCGCTC TCGCTGTTCG CCTCGCGCAA CGTCGCGCTC GCGAACGTGA TCGCCGTGCT GTGGGCGGCC GCGATGTTCG CGTGGTTCTT CCTGTCCGCG CTGTACATGC AGCGCGTGCT CGGCTACGGG CCGCTGCAGG TCGGCCTCGC GTTCCTGCCG GCGAACCTGA TCATGGCCGT GTTCTCGCTC GGGCTGTCGG CACGCATCGT GATGCGCTTC GGGATCCGCG GCCCGATCGC CGCCGGCCTG CTGATCGCGG CCTGCGGCCT CGCGCTGTTC TCGCGCGCAC CGGTGGACGG CGGCTTCGTC TGGCACGTGC TGCCCGGCAT GACGCTGCTC GGCATCGGCG CGGGCGTCGC GTTCAATCCG ATGCTGCTCG CCGCGATGAG CGACGTCGAT CCGGCGGATT CCGGGCTCGC GTCGGGGATC GTCAACACCG CGTTCATGAT GGGCGGCGCA CTCGGCCTCG CCGTGCTCGC GAGCCTCGCC GCCGCCCGCA CCGATGCACT CGCGGCCGCG AACGCCGCGC CGCTCGACGC GCTGAACGGC GGCTACCATG CGGCCTTCGC GTTCGGCGCG GCATTCGCTG CCGCCGCCGC GCTGATCGGC CTCGCGCTGC GCATCCGGCG GCAGGGAGCG GTCGAAGGCG TCGGCCCCGC GATGCACTGA
|
Protein sequence | MTHGIHGEKR WYALIVLCLG VLMIVLDSTI VNVALPSIST DLHFTETALV WVVNAYLLTF GGCLLLGGRL GDLYGQRRMF LAGLVVFTLA SLACGLAQSQ TMLIAARAVQ GIGGAVVSAV ALSLIMNLFT EPGERARAMG VYGFVCAGGG SIGVLLGGLL TSSLSWHWIF LVNLPIGIAV YAMCVALLPR LRAPAGTARL DVAGAITVTA SLMLAVYGIV GGNEAGWLST QTVSLIGAAV VLLALFIAIE ARAAHPLMPL SLFASRNVAL ANVIAVLWAA AMFAWFFLSA LYMQRVLGYG PLQVGLAFLP ANLIMAVFSL GLSARIVMRF GIRGPIAAGL LIAACGLALF SRAPVDGGFV WHVLPGMTLL GIGAGVAFNP MLLAAMSDVD PADSGLASGI VNTAFMMGGA LGLAVLASLA AARTDALAAA NAAPLDALNG GYHAAFAFGA AFAAAAALIG LALRIRRQGA VEGVGPAMH
|
| |