Gene Bcep18194_A3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3935 
Symbol 
ID3749120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp855248 
End bp856687 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content71% 
IMG OID637762214 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_368178 
Protein GI78065409 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000976381 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCACG GGATTCACGG CGAGAAGCGC TGGTACGCGC TGATCGTCCT CTGCCTCGGC 
GTGCTGATGA TCGTGCTCGA CAGCACGATC GTGAACGTTG CACTGCCGTC GATCAGCACC
GACCTCCACT TCACCGAGAC GGCCCTCGTG TGGGTCGTCA ACGCGTACCT GCTGACGTTC
GGCGGCTGCC TGCTGCTCGG CGGACGGCTC GGCGACCTGT ACGGCCAGCG GCGCATGTTC
CTCGCCGGCC TCGTCGTCTT CACGCTCGCA TCGCTTGCGT GCGGCCTCGC GCAGTCGCAG
ACGATGCTGA TCGCCGCGCG CGCGGTGCAG GGGATCGGCG GTGCAGTCGT ATCGGCCGTC
GCGCTGTCGC TGATCATGAA TCTCTTCACC GAGCCCGGCG AGCGCGCCCG CGCGATGGGC
GTGTACGGCT TCGTCTGCGC CGGCGGCGGC AGCATCGGCG TGCTGCTCGG CGGGCTGCTG
ACGAGCTCGC TGTCGTGGCA CTGGATCTTC CTCGTCAACC TGCCGATCGG CATCGCGGTC
TATGCGATGT GCGTCGCGCT GCTGCCGCGC CTGCGCGCGC CGGCCGGCAC CGCGCGGCTC
GACGTCGCGG GTGCGATCAC CGTCACTGCA TCGCTGATGC TGGCCGTCTA CGGGATCGTC
GGCGGCAACG AGGCCGGCTG GCTGTCGACG CAGACCGTTT CACTGATCGG CGCGGCCGTC
GTGCTGCTCG CGCTGTTCAT CGCGATCGAG GCGCGCGCCG CGCATCCGCT GATGCCGCTC
TCGCTGTTCG CCTCGCGCAA CGTCGCGCTC GCGAACGTGA TCGCCGTGCT GTGGGCGGCC
GCGATGTTCG CGTGGTTCTT CCTGTCCGCG CTGTACATGC AGCGCGTGCT CGGCTACGGG
CCGCTGCAGG TCGGCCTCGC GTTCCTGCCG GCGAACCTGA TCATGGCCGT GTTCTCGCTC
GGGCTGTCGG CACGCATCGT GATGCGCTTC GGGATCCGCG GCCCGATCGC CGCCGGCCTG
CTGATCGCGG CCTGCGGCCT CGCGCTGTTC TCGCGCGCAC CGGTGGACGG CGGCTTCGTC
TGGCACGTGC TGCCCGGCAT GACGCTGCTC GGCATCGGCG CGGGCGTCGC GTTCAATCCG
ATGCTGCTCG CCGCGATGAG CGACGTCGAT CCGGCGGATT CCGGGCTCGC GTCGGGGATC
GTCAACACCG CGTTCATGAT GGGCGGCGCA CTCGGCCTCG CCGTGCTCGC GAGCCTCGCC
GCCGCCCGCA CCGATGCACT CGCGGCCGCG AACGCCGCGC CGCTCGACGC GCTGAACGGC
GGCTACCATG CGGCCTTCGC GTTCGGCGCG GCATTCGCTG CCGCCGCCGC GCTGATCGGC
CTCGCGCTGC GCATCCGGCG GCAGGGAGCG GTCGAAGGCG TCGGCCCCGC GATGCACTGA
 
Protein sequence
MTHGIHGEKR WYALIVLCLG VLMIVLDSTI VNVALPSIST DLHFTETALV WVVNAYLLTF 
GGCLLLGGRL GDLYGQRRMF LAGLVVFTLA SLACGLAQSQ TMLIAARAVQ GIGGAVVSAV
ALSLIMNLFT EPGERARAMG VYGFVCAGGG SIGVLLGGLL TSSLSWHWIF LVNLPIGIAV
YAMCVALLPR LRAPAGTARL DVAGAITVTA SLMLAVYGIV GGNEAGWLST QTVSLIGAAV
VLLALFIAIE ARAAHPLMPL SLFASRNVAL ANVIAVLWAA AMFAWFFLSA LYMQRVLGYG
PLQVGLAFLP ANLIMAVFSL GLSARIVMRF GIRGPIAAGL LIAACGLALF SRAPVDGGFV
WHVLPGMTLL GIGAGVAFNP MLLAAMSDVD PADSGLASGI VNTAFMMGGA LGLAVLASLA
AARTDALAAA NAAPLDALNG GYHAAFAFGA AFAAAAALIG LALRIRRQGA VEGVGPAMH