Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_A3779 |
Symbol | |
ID | 3748964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007510 |
Strand | - |
Start bp | 673579 |
End bp | 674646 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637762059 |
Product | dihydrouridine synthase TIM-barrel protein nifR3 |
Protein accession | YP_368024 |
Protein GI | 78065255 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGTTA TCGGCCCTCA CGTATTGCGT AACAACCTGT TCGTCGCCCC GATGGCCGGC GTGACGGATC GTCCGTTCCG CCAGCTCTGC AAGCGGCTCG GGGCCGGTTA CGCCGTGTCC GAGATGGTCG CGTCCAACGC GCAGCTGTGG AAAAGCGCGA AGACGATGCG GCGTGCGAAC CACGAAGGCG AGGTCGAGCC GATCGCGGTC CAGATCGCGG GCGCCGATCC GGCGATGATG GCCGAAGCGG CCCGCTACAA CGTCGACAAC GGCGCGCAGA TCATCGACAT CAACATGGGC TGCCCGGCGA AAAAGGTCTG CAACGTCGCG GCCGGCTCCG CGCTGCTGCA GAACGAACCG CTGGTGCAAC GCATCGTCGA GGCCGTCGTC GCGGCGGTCG GCACGGGGCC CGATGCGGTA CCCGTCACGC TGAAGATCCG CACGGGCTGG GATCGCGAGC ACAAGAACGC GATCACGGTC GCGCGCCTCG CCGAAGCCGC CGGCATCTCG ATGCTCACCG TGCACGGCCG CACGCGCGCC GACCTGTACC GCGGCGACGC CGAATACGAC ACCATCGCGG CCGTGAAGGC GGCCGTACGG ATTCCGGTGG TCGCGAACGG CGACATCACG TCGCCCGCGA AGGCGAAGGC CGTGCTCGAT GCAACCGGCG CCGACGCGCT GATGATCGGT CGTGCCGCGC AAGGTCGGCC GTGGCTGTTC CGCGAAATCG ATCATTTCCT GCAAACCGGC GAGCTGCTGC CCCCGCCGCT GATCGACGAG ATCCAGCACG TGATGAACGA ACACCTGGAA GACCACTACG CTTTCTATGG TGAATTCACG GGAGTCCGTA CTGCGCGCAA GCACATCGGC TGGTACACTC GCGGCCTTTC CGGTGCCAAC GGGTTCCGGC ACAGGATGAA CACGCTCGAT TCCTCCCGCG AGCAGCTCGC CGCCGTCAAT GCATTCTTTG AGGCGCAAAA GGCGCTGTCG GACCACCTCG TCTACGTCGA TGACGAAGAG GAAAACGGCC AGGGCGAGTC GGACGACCAT AACCAGTTAG CAGCATGA
|
Protein sequence | MPVIGPHVLR NNLFVAPMAG VTDRPFRQLC KRLGAGYAVS EMVASNAQLW KSAKTMRRAN HEGEVEPIAV QIAGADPAMM AEAARYNVDN GAQIIDINMG CPAKKVCNVA AGSALLQNEP LVQRIVEAVV AAVGTGPDAV PVTLKIRTGW DREHKNAITV ARLAEAAGIS MLTVHGRTRA DLYRGDAEYD TIAAVKAAVR IPVVANGDIT SPAKAKAVLD ATGADALMIG RAAQGRPWLF REIDHFLQTG ELLPPPLIDE IQHVMNEHLE DHYAFYGEFT GVRTARKHIG WYTRGLSGAN GFRHRMNTLD SSREQLAAVN AFFEAQKALS DHLVYVDDEE ENGQGESDDH NQLAA
|
| |