| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3692 |
|---|
| Symbol | |
|---|
| ID | 3748876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 579270 |
|---|
| End bp | 580619 |
|---|
| Gene Length | 1350 bp |
|---|
| Protein Length | 449 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637761972 |
|---|
| Product | UDP-N-acetylmuramate/L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase |
|---|
| Protein accession | YP_367937 |
|---|
| Protein GI | 78065168 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
|---|
| TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.471956 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGGTC TCGCCGTACT CGCGCGCGAG GCGGGCCACA CGGTGACGGG TTGCGACGCG
GGCGTCTATC CGCCGATGAG CACGCAGCTC GAGGCGCAGG GCATCACGCT GATCGAGGGC
TACGGCGCCG AGCAGATCGA CCTGAAACCG GACCTGTTCG TGATCGGCAA CGTCGTCACG
CGCGGCAATC CGCTGATGGA AGCAATCCTG GATCGCGGCC TGCCGTACGT GTCGGGCCCG
CAGTGGCTCG GCGAGCACGT GCTGGCCGGC AAATGGGTGC TCGCGGTCGC GGGCACGCAC
GGCAAGACCA CCACGTCGTC GATGCTTGCG TGGCTGCTGG AAGACTCGGG CCTGAATCCG
GGCTTCCTGA TCGGCGGCGT GCCGCTGAAC TTCGGCGTGT CGGCGCGGCT CACCGATTCG
AGCTTCTTCG TGATCGAGGC CGACGAATAC GATACGGCGT TCTTCGACAA GCGCTCGAAG
TTCGTCCACT ATCGGCCGCG CACCGCGGTG CTGAACAATC TCGAATTCGA TCACGCCGAC
ATCTTCCCGG ATCTCGCCGC GATCGAGACG CAATTCCACC ATCTCGTCCG TACCGTGCCC
GGTGTCGGCC GGATCGTCAC GAACGGCCGC TCGGACGCGC TCGAGCGCGT GCTGGCGCGC
GGTTGCTGGA GCGAGGTCGA GCGGTTCGGC GTCGACGGCG GCTGGCAGGC GCTGCCGGCC
GAGGACGGTG TGCCGGTCGA CGAGCGCTTC GCGGTGTATT CGCACGCGGA ACGTGTCGGT
GAAGTTACGT GGCAAGTACA GGGCGATCAC AACCGGATGA ACGCGCTCGC GGCGATCGCG
GCTGCGCGCC ACGTCGGTGT GCCGCCCGCG CAGGCGGCCG AATCCCTCGC GTCGTTCCGC
AACGTGAAGC GCCGGATGGA AGTGCGCGGC AGCGTGGACG GCGTGACCGT CTACGACGAC
TTCGCGCACC ATCCGACCGC GATCGAAACC ACGATCGCCG GCCTTCGTGC ACGCATCGGC
AGCGAGAATG CTCGCATCCT CGCCGTGCTC GAGCCGCGTT CGAACACGAT GAAGCTCGGC
GTGATGAAGT CGCAATTGCC GGCGAGCCTG GCCGATGCCG ATCTCGTGTT CGGCTACGGC
GCGCCGACCG GGCGCGACGC GCTCGGCTGG AACCTGGCCG AGGCGCTGGC GCCGCTGGGC
GAGAAGGCGC ACGCATTCGA CGATCTGCAC CTGCTGGTGA AGTCCGTCGT CGCAGCCGCG
CGCCCGGGCG ACCACGTGCT CGTGATGAGC AACGGCGGCT TCGGCGGCGT GCACCAGAAG
CTGCTCGATG CGCTCGGGAG CCGCACGTGA
|
|---|
| Protein sequence | MGGLAVLARE AGHTVTGCDA GVYPPMSTQL EAQGITLIEG YGAEQIDLKP DLFVIGNVVT
RGNPLMEAIL DRGLPYVSGP QWLGEHVLAG KWVLAVAGTH GKTTTSSMLA WLLEDSGLNP
GFLIGGVPLN FGVSARLTDS SFFVIEADEY DTAFFDKRSK FVHYRPRTAV LNNLEFDHAD
IFPDLAAIET QFHHLVRTVP GVGRIVTNGR SDALERVLAR GCWSEVERFG VDGGWQALPA
EDGVPVDERF AVYSHAERVG EVTWQVQGDH NRMNALAAIA AARHVGVPPA QAAESLASFR
NVKRRMEVRG SVDGVTVYDD FAHHPTAIET TIAGLRARIG SENARILAVL EPRSNTMKLG
VMKSQLPASL ADADLVFGYG APTGRDALGW NLAEALAPLG EKAHAFDDLH LLVKSVVAAA
RPGDHVLVMS NGGFGGVHQK LLDALGSRT
|
|---|
| |