Gene Bcep18194_A3462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3462 
SymbolrplF 
ID3748639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp329421 
End bp329951 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID637761736 
Product50S ribosomal protein L6 
Protein accessionYP_367708 
Protein GI78064939 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000287307 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00473222 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTCGAG TAGGTAAGAG CCCGATCGCG CTGCAAGGCG CGGAAGTCAA GCTGGCCGAC 
GGTGCGATCA CCGTCAAGGG CCCGCTGGGC ACCATCACGC AAGCGATCAA TCCGCTCGTG
AACGTGGCGA ACAACGACGG TACGCTGAAC CTGGCGCCGG TTGACGAAAG CCGCGAAGCA
AATGCACTGT CGGGCACGAT GCGCGCGATT ATCGCGAATG CCGTGCACGG CGTGACCAAG
GGTTTCGAGC GCAAGCTGAC GCTGGTTGGC GTCGGTTATC GTGCGCAAGC GCAAGGCGAC
AAGCTGAACC TGTCGCTGGG TTTCTCGCAC CCGGTGGTGC ACCAGATGCC GGAAGGCGTC
AAGGCAGAAA CCCCGACGCA AACCGAAATC GTGATCAAGG GGATCAACAA GCAACAAGTC
GGTCAAGTGG CTGCGGAAGT CCGCGGTTAC CGTCCGCCGG AGCCCTACAA GGGCAAGGGC
GTGCGCTATT CCGACGAGGT TGTGATCCTC AAAGAAACGA AGAAGAAGTA A
 
Protein sequence
MSRVGKSPIA LQGAEVKLAD GAITVKGPLG TITQAINPLV NVANNDGTLN LAPVDESREA 
NALSGTMRAI IANAVHGVTK GFERKLTLVG VGYRAQAQGD KLNLSLGFSH PVVHQMPEGV
KAETPTQTEI VIKGINKQQV GQVAAEVRGY RPPEPYKGKG VRYSDEVVIL KETKKK