Gene Bcep18194_A3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcep18194_A3453 
SymbolrpsC 
ID3748630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia sp. 383 
KingdomBacteria 
Replicon accessionNC_007510 
Strand
Start bp325435 
End bp326235 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content61% 
IMG OID637761727 
Product30S ribosomal protein S3 
Protein accessionYP_367699 
Protein GI78064930 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0092] Ribosomal protein S3 
TIGRFAM ID[TIGR01009] ribosomal protein S3, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000212964 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00445176 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGGACAGA AAATTCATCC GACTGGCTTC CGCCTGGCTG TCAGCCGCAA TTGGGCTTCG 
CGTTGGTACG CGAACAACAA CAATTTCGCG GCGATGCTGC AGGAAGACAT CGGTGTTCGT
GAATACCTGA AGAAGAAGCT GAAGAACGCT TCGGTCGGTC GGGTCGTCAT CGAGCGTCCG
GCGAAGAACG CGCGCATCAC GATTTACAGC TCGCGTCCGG GTGTGGTCAT CGGCAAGAAG
GGCGAGGATA TCGAGCAGCT GAAGACGGAA CTGCAACGCC GCATGGGCGT TCCGGTCCAC
GTCAACATCG AAGAAATCCG CAAGCCGGAA ACCGATGCTC AGCTGATCGC TGACTCGATC
ACGCAACAGC TCGAGCGCCG GATCATGTTC CGTCGCGCGA TGAAGCGTGC GATGCAGAAC
GCGATGCGTC TGGGTGCCCA GGGCATCAAG ATCATGAGCG CGGGCCGTCT GAACGGTATC
GAAATCGCTC GTACGGAGTG GTATCGCGAA GGTCGCGTGC CCCTTCACAC GCTGCGTGCT
GATATCGACT ACGCGACCTC GGAAGCGAAG ACGACCTACG GGATCATCGG CGTCAAGGTG
TGGGTTTACA AGGGCGATAC GCTCGGCCGC AACGACGCAC CGGTGGTGGA AGAAGTAGCC
GAAGACAAGC GTCCGCGTCG CAATGCGCGT CCGGGCGACC GTCGTCCGCG CCGTGATGGC
GAAGGCGGCG CTCCGGGTGC TCGTCGTGGC GCACCGCGCC GTGGCGCCGG CAAGCCCGAA
GACGGCAAGA CTGGAGAATA A
 
Protein sequence
MGQKIHPTGF RLAVSRNWAS RWYANNNNFA AMLQEDIGVR EYLKKKLKNA SVGRVVIERP 
AKNARITIYS SRPGVVIGKK GEDIEQLKTE LQRRMGVPVH VNIEEIRKPE TDAQLIADSI
TQQLERRIMF RRAMKRAMQN AMRLGAQGIK IMSAGRLNGI EIARTEWYRE GRVPLHTLRA
DIDYATSEAK TTYGIIGVKV WVYKGDTLGR NDAPVVEEVA EDKRPRRNAR PGDRRPRRDG
EGGAPGARRG APRRGAGKPE DGKTGE