| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3339 |
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| Symbol | |
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| ID | 3748506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia sp. 383 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007510 |
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| Strand | + |
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| Start bp | 192531 |
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| End bp | 194729 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637761603 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_367585 |
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| Protein GI | 78064816 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF
[COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.469864 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGAA CAGGACAGGC ATTGCAGGCG GCGCTCGCGC ATCATGAGGC GGGGCGTCTC
GCCGAAGCGA AGACGCTGTA CGACGCGATC CTCACCGCGC AGCCGGGCCA GCCGGATGCG
CTGCATTTTC TCGGGCTGCT GGCGTGCCAG CTGAAGCAGT ACGACGCGGG CATCGCGCTG
ATGGAGCAAT CGCTCGTCGA GCGACCGGAC GCGTCGTACT TCAACAACCT GGGCAACATG
CTGCGCGAAA ACGGTCGGCT CGACGACGCG ATCGCGCACT ATCGGCGCGC GGTGGCGCTG
CGGCCGGACT ATCCGGAGGC GCACAACAAT CTCGGCAACG CGTTGCGCGA CGCGCGCGAG
CCGGCGGCCG CGATGGAGAG CTGCGCGCGT GCGATCGAGC TGCGCCCCGG TTACGCGGAG
GCGTACAACA ACCTTGGCAA CGCGCTGCAG GATCTGGGCG ACTTTGATCG CGCCGCGTCG
CACTACGGCC GCGCGATCGA GCTGGACCCG TCGATGGCGA TGGCCCACGC GAACTTGAGC
GCGGTGCGTC ACCGGCAGCT GCGCTGCGCG GAAGCGCTCG CGCATGCGCA GGACGCGATC
CGGCTCGCGC CGAACCTCGC CGACGCGCAC AACCACGCGG GCAACGCGTA TCACGGACTG
GACCGGCTCG ATGCGGCGCA GGCCAGCCAC CGCACGGCTG TCACGCTGAA TCCGGCGGAC
GCCGGCGCGT GCCACAACCT GTCCGTCGTG CTGCTGAAGC TGCAGCGGCT CGACGAGGCG
CTCGTGTATT GCCGGCAGGC GTTGCAGGCC GGCCCGCCGG CCGCGTTGAT GCACGTCAAT
CTCGGCGACA TCCTGCGCGC GCAGGGCAAC GTCGATGCCG CGGTCCACGC GTATCGCGAT
GCGCTTGCGC TGGTGCGCGA CGACGCCGAC GACGTCGCGG CGACCGTGCT GAACCGGCTG
CTGTTCAGCG CGGCGGCGTC CGCTTGCGTG AACCCCGCCG ACTACCTGGC CGACGCGCGG
CGCTACGGCC GGCACCTGGC CGCGCGTTCG ACGCGCCATG CGCACGATCC GCGTGAGCGG
GCCGCGCGCG CGCAGGGGCG GCCACTGCGT GTCGGCTTCG TGTCCGGCGA CCTGCGCCTG
CATCCGGTCG GCATCTTCCT GGAAAGCGTG CTCGCGCACC TCGAGCGCAC GCGCATCGAC
CTGCGCGTGT ACGTGACCAC GGACGAGGAG GACGCGATCA CCGCGAAACT GAAGCCGCAC
GCGAGCGGCT GGCGTTCGAT CGCCGCGCTG GGTCCGGACG CGGCCGCGCG GATGATTCAC
GACGACGAAA TCGACGTCCT CGTCGACCTC GCCGGCCATA CGCAGTCGAG CGGGTTGGCC
GTTTTTGGCT GGAAACCCGC GCCGGTACAG GCGAGCTGGC TCGGCTTCTT CGCGTCGACC
GGCTGCGACG CGATCGATTA CTTCATCGGC GACCGCTACA CGCAGCCGGA CGCCGAAGCG
CATCACTTCG TCGAGAAGCC GTGGCGGCTG CCGGACAGCT TCCTGTGCTT CACGCCGCCG
GCCTGCGACG TCGAGGTCGG GCCGCTGCCG ATGGCGGCGC GCGGCCATCC GACGTTCGGT
TGCTTCGGCC AGCTCGTGAA GATCGGCGAC GACGTCGTGC GCGCATGGTC GCGCATCCTG
CACGCGCTGC CGGACGCGCG GCTGCTGCTC AAGGCGCACG AACTCGGCCG CGAGGGCGTG
CGCGACGCGA CCGCCGCGCG CTTCGCGCGG CATGGCATCG ACCCGGACCG GCTGATCCTC
GAGGGCGGTT CGCCGCGCGC GGAATACTTT GCCGCGTATA ACCGCATCGA CGTCGCGCTG
AGCCCGTTTC CGTACCCGGG CGGCACGACC ACCGCCGAAG CGCTGTGGAT GGGCGTGCCG
GTGCTCGGGA TGAAGGGCGG CCGGTTCGTC ACGCACATTT GCGAAAGCGT GCTGCACGCG
GCGGGCATGG GCGAATGGGT CGCTGACGGC GAGGACGCCT ACGTCGCGAA GGCGATCGCG
GCGGTGCGCG ACCGCGAGCC GCTCGCGACG CTGCGCGCCG GGCTGCGCGC GCAACTGCTC
GCGTCGCCGC TGTGCGACGC GCGCCGGTTC GCGGCGCATC TCGAAGCGGC GTTCATCGGC
ATGTGGCAAC GCTATACGAA CTCGGAACAC GAAGCATGA
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| Protein sequence | MDGTGQALQA ALAHHEAGRL AEAKTLYDAI LTAQPGQPDA LHFLGLLACQ LKQYDAGIAL
MEQSLVERPD ASYFNNLGNM LRENGRLDDA IAHYRRAVAL RPDYPEAHNN LGNALRDARE
PAAAMESCAR AIELRPGYAE AYNNLGNALQ DLGDFDRAAS HYGRAIELDP SMAMAHANLS
AVRHRQLRCA EALAHAQDAI RLAPNLADAH NHAGNAYHGL DRLDAAQASH RTAVTLNPAD
AGACHNLSVV LLKLQRLDEA LVYCRQALQA GPPAALMHVN LGDILRAQGN VDAAVHAYRD
ALALVRDDAD DVAATVLNRL LFSAAASACV NPADYLADAR RYGRHLAARS TRHAHDPRER
AARAQGRPLR VGFVSGDLRL HPVGIFLESV LAHLERTRID LRVYVTTDEE DAITAKLKPH
ASGWRSIAAL GPDAAARMIH DDEIDVLVDL AGHTQSSGLA VFGWKPAPVQ ASWLGFFAST
GCDAIDYFIG DRYTQPDAEA HHFVEKPWRL PDSFLCFTPP ACDVEVGPLP MAARGHPTFG
CFGQLVKIGD DVVRAWSRIL HALPDARLLL KAHELGREGV RDATAARFAR HGIDPDRLIL
EGGSPRAEYF AAYNRIDVAL SPFPYPGGTT TAEALWMGVP VLGMKGGRFV THICESVLHA
AGMGEWVADG EDAYVAKAIA AVRDREPLAT LRAGLRAQLL ASPLCDARRF AAHLEAAFIG
MWQRYTNSEH EA
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