| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_A3292 |
|---|
| Symbol | hemE |
|---|
| ID | 3748438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007510 |
|---|
| Strand | + |
|---|
| Start bp | 126709 |
|---|
| End bp | 127887 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637761555 |
|---|
| Product | uroporphyrinogen decarboxylase |
|---|
| Protein accession | YP_367538 |
|---|
| Protein GI | 78064769 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.136246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA TCGCGTCGGC AAGCGCAGCC CGACGGCGGC TGTCCGGTAA AATGCCGCTT
TGCCCTCGCA TCGTCGCTCC TACCGTGGCC CATACCCTGC TTAACGACAC CTTCCTGCGT
GCGCTTCTGC GCGAGCCGAC CGACTACACG CCGATCTGGC TGATGCGCCA GGCCGGCCGC
TACCTGCCCG AATACAACGC GACGCGCGCG CGCGCCGGCA GCTTCCTCGG TCTCGCGAAG
AATCCCGACT ACGCGACCGA AGTGACGCTG CAGCCGCTCG AGCGCTTTCC GCTCGACGCC
GCGATCCTGT TCTCTGACAT CCTGACGATT CCGGACGCGA TGGGGCTCGG CCTCGACTTC
CAGGTCGGCG AAGGGCCGAA GTTTGCGCAT CCGGTGCGTA CCGAGGCCGA CGTCGCGAAG
CTCGCGGTGC CGGACATCGA AGAGACGCTC GGCTACGTAA CGGGCGCCGT GCGCGAGATC
CGCCGCGCGC TCACCGACGG CCAGGGCCGC CAGCGCGTGC CGCTGATCGG CTTTTCGGGC
AGCCCGTGGA CGCTCGCGTG CTACATGGTC GAAGGCGGCG GGTCGGACGA TTTCCGCACG
GTGAAGTCGA TGGCGTATTC GCGCCCCGAC CTGATGCACC GGATCCTCGA CGTGAACGCG
CAGGCGGTGG CCGCGTACCT GAACGCGCAG ATCGAAGCGG GCGCGCAGGC CGTGATGATC
TTCGATACGT GGGGCGGCGC GCTGGCGGAC GGCGCGTACC AGCGCTTCTC GCTGGACTAC
ATCCGCCGCG TCGTCTCGCA GCTCAAGCGC GAGCACGACG GCGAGCGCGT GCCGGTGATC
ACGTTCACCA AGGGCGGCGG GCTGTGGCTC GAGGAGATCG CGGCGACCGG CGTCGACGCG
GTCGGGCTCG ACTGGACCGT CAACCTCGGC AAGGCGCGCG AGCGCGTCGC GGGCAAGGTC
GCGCTGCAGG GCAACCTCGA CCCGACGATC CTGTTTGCGC CGCCGGCTGC AGTACGCGAG
CAGGCGCGCG CGGTGCTCGA CAGCTACGGC AATCATCCGG GCCACGTCTT CAACCTCGGG
CACGGCATTT CGCAGTTTAC GTCGCCCGAT CACGTCGCCG AACTCGTCGA CGAAGTGCAT
AGCCACAGCC GCGCGATTCG TAGCGGAGCC GCTGGCTGA
|
|---|
| Protein sequence | MAAIASASAA RRRLSGKMPL CPRIVAPTVA HTLLNDTFLR ALLREPTDYT PIWLMRQAGR
YLPEYNATRA RAGSFLGLAK NPDYATEVTL QPLERFPLDA AILFSDILTI PDAMGLGLDF
QVGEGPKFAH PVRTEADVAK LAVPDIEETL GYVTGAVREI RRALTDGQGR QRVPLIGFSG
SPWTLACYMV EGGGSDDFRT VKSMAYSRPD LMHRILDVNA QAVAAYLNAQ IEAGAQAVMI
FDTWGGALAD GAYQRFSLDY IRRVVSQLKR EHDGERVPVI TFTKGGGLWL EEIAATGVDA
VGLDWTVNLG KARERVAGKV ALQGNLDPTI LFAPPAAVRE QARAVLDSYG NHPGHVFNLG
HGISQFTSPD HVAELVDEVH SHSRAIRSGA AG
|
|---|
| |