Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcep18194_C7685 |
Symbol | |
ID | 3734092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia sp. 383 |
Kingdom | Bacteria |
Replicon accession | NC_007509 |
Strand | + |
Start bp | 1332410 |
End bp | 1333582 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637761386 |
Product | outer membrane protein (porin) |
Protein accession | YP_367373 |
Protein GI | 78060798 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.350624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGG TCCGTTCACT CGCACTGCTC GCGCTACCGG CCGCGCTCTA CGCCGCCGGC GCGCACGCAC AAAGCAGCGT CACGCTGTAC GGCATCGCCG ATGCGGGCAT CGCGTACGTG CACAACGCGC AGAACGCGAA CGGCAGCAAT GCGTCGAGCC TCGTCAAGTT CAGCAGCGGC AACCTGTCGG GTAGCCGCTG GGGGCTGCGC GGCACCGAGG ATCTCGGCGG CGGCCTGGCC GCGCTGTTCC AGCTCGAGAA CGGCTTCAAC ATCGGCACGG GCGCACTCGG CCAGGGCTCG CGCGAATTCG GCCGCAAGGC CGTCGTCGGC CTCTCGAGCA GCACGTACGG CACCGTGACG CTCGGCCGCC AGTACGATCC GGTCGTCGAT CTCGTGCAAG GCCTCACGCA GGACAACTAC TTCGGCGGCG TGTTCGCGAC GCCGGGCGAC CTCGACAACT ACGACAACAG CCTGCGCGTC AGCAACTCGG TGAAGTACAC GAGCCCGCTG ATCTCGGGCT TCCAGTTCGA AGGCCTGTAC GGCTTCGGCG GCGTCGCGGG CGCCACCGGC AGCGGCCGCA CGTACAGCTT CGGCGCAAGC TACGCGAACG GCCCGCTGTC GCTCGGTGCC GGCTTCTTCT ATGCGAACGG CGGCTCCACC GTCGCGAACG GCGTGCGCAA CTGGTCGAGC AGCTCGGACA CGCTGTTCAA CACCGTGATC AACCAGGGCT TCTCGAGCGC GAAGTCGATC CAGATCGTGC GCGTGGCCGG CCAGTACGTG GCCGGGCCCG CCACCTTCGG CCTCGCGTAT TCGAACACGC AGTACGGCGC GGACACGCTG TCGGCATTCA GCCAGAACGC GAAGTTCAAC AACGGCTCGG CGTTCTTCAA CTGGCAGTTC TCGCCGGCGC TGCGCGCGGG CGTCGGCTAC AACTACACGT CGCTGACGGG CCCGTCTTCC GCGCACTACA ACCAGGTCAA CCTCGGCGCG GACTACGCGC TGTCGAAACG CACCGACCTG TATGCGCTGT TCGGCTACCA GAAGGCGAGC GGCAACACGC TCAACGCGAA CGGCGCGGTC GTGAAGGCCG CCGCGTCGGT CGGCTCGTAC GGCGTGAACT CCGGCACCGA TACGCAGGAA CTCGCGATCG TCGGGATTCG CCACAAGTTC TGA
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Protein sequence | MKQVRSLALL ALPAALYAAG AHAQSSVTLY GIADAGIAYV HNAQNANGSN ASSLVKFSSG NLSGSRWGLR GTEDLGGGLA ALFQLENGFN IGTGALGQGS REFGRKAVVG LSSSTYGTVT LGRQYDPVVD LVQGLTQDNY FGGVFATPGD LDNYDNSLRV SNSVKYTSPL ISGFQFEGLY GFGGVAGATG SGRTYSFGAS YANGPLSLGA GFFYANGGST VANGVRNWSS SSDTLFNTVI NQGFSSAKSI QIVRVAGQYV AGPATFGLAY SNTQYGADTL SAFSQNAKFN NGSAFFNWQF SPALRAGVGY NYTSLTGPSS AHYNQVNLGA DYALSKRTDL YALFGYQKAS GNTLNANGAV VKAAASVGSY GVNSGTDTQE LAIVGIRHKF
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