| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcep18194_C7659 |
|---|
| Symbol | |
|---|
| ID | 3734701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia sp. 383 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007509 |
|---|
| Strand | + |
|---|
| Start bp | 1303571 |
|---|
| End bp | 1304593 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637761360 |
|---|
| Product | outer membrane protein (porin) |
|---|
| Protein accession | YP_367347 |
|---|
| Protein GI | 78060772 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3203] Outer membrane protein (porin) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.24829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTCC GATCGTTGTG CACCGCCGCG CTGTGCTGCG CGGCCGCCGG CCTGCTGGCC
GGCCGTTCGT CCCACGCTCA AACGTCCGCG ACGCTGTACG GCCTGATCGG GCTCGACGTC
GCCAGCACGA AGCGCAGCGG CGGCCCGCCG GCCGCGATCG CGATGCAGAG CCCCGGGCTT
ACCGCGCCGT ACTGGGGCCT GCGTATCGCC GAGGATCTCG GCGGCGGTTA CCGCGCGCTC
GCCGTGCTCG AAAGCTTCTT CCAGCCGGTC AACGGCGGCA TCGGCCGCAC GTCGGCCGAC
CCGTACTGGG GACGCAACGC GTATGCGGGC ATCGAAGGCC CGTTCGGCAC CGTGACGCTG
GGGCGGCAAA CCAACCTGCT GTATCTCGCC GAACAGGCCG TCAATCCGTT TCGCGCGTCG
ATCCTGTTCT CGCCGCTCGT GATGCAGACC TTCGTCGCGT CGTACGGCGG CGCGATCGCC
GGCGACACGG TCTGGAACAA CGCGATCCAG TACACGAGCC CGACCGTCGG CGGACTGACC
GCGAGCGCCG TCTATGCGCC CGGCGGCCTC GCCGGCGCGA ACGGCGCGGC CAACGCGGGC
CTGTCGCTGC GCTACGCGAG CGGCCCGCTC ACGGCGGTCG CGGCCGCGCA GCGCACGCGG
ATCGTCGCGG GTGCGGCCGC GCCGACCCAG CACGCGTATC TCGCCGGCTT TGCGTACGCG
TTCCCGCGCA TCACGCTGTA CGGCGCGATC CAGGGCACGC GTACGACCGC GACCGACACC
GGTTCGCACA CGTTCGAAGC CGGCGTGTCG GTACCCGTCA CGTCGCGGCT GTCCGCGCTC
GGCGAATGGG CGTACACGCG CCGCACCGCG GCGCGCACGG CCGTGTCGCG CAACACGGGC
GTCGCCGGGC TCGACTACTC GCTGTCGCGG CGCACCGACG TCTATGCGCT CGCCGGATAC
GACCGGCTCG GCGGCAGCGG CGTCGCGGCG ACCTGGGCGC TCGGCATCCG GCACCTGTTC
TGA
|
|---|
| Protein sequence | MKVRSLCTAA LCCAAAGLLA GRSSHAQTSA TLYGLIGLDV ASTKRSGGPP AAIAMQSPGL
TAPYWGLRIA EDLGGGYRAL AVLESFFQPV NGGIGRTSAD PYWGRNAYAG IEGPFGTVTL
GRQTNLLYLA EQAVNPFRAS ILFSPLVMQT FVASYGGAIA GDTVWNNAIQ YTSPTVGGLT
ASAVYAPGGL AGANGAANAG LSLRYASGPL TAVAAAQRTR IVAGAAAPTQ HAYLAGFAYA
FPRITLYGAI QGTRTTATDT GSHTFEAGVS VPVTSRLSAL GEWAYTRRTA ARTAVSRNTG
VAGLDYSLSR RTDVYALAGY DRLGGSGVAA TWALGIRHLF
|
|---|
| |