| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3143 |
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| Symbol | |
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| ID | 3725851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | - |
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| Start bp | 3663225 |
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| End bp | 3664853 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637752755 |
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| Product | inner-membrane protein |
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| Protein accession | YP_358548 |
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| Protein GI | 77920733 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.000000171877 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAACA AAAATGTTAT TATAGCTCTT TTGCTCATGG TGTTGATTTG GACGGGCTAT
ACCACTTTTT TTGTCAAGCC CGCTCCGGCT CCTGTCAATG ACGAGCCGGC CGTTGCCGAA
TCATTTCCTG CCGTTACTCC CGAGGTTGTC GGGGAAAGGG TCGTTCCCTC CGTAGATCAT
GTTATGGCCG CTGCCGCGTC ATCGGATATC GCTCCGCGGG ATTTTGTCGT GGATACCGAG
GATTTTCGGG CCGTATTTAC CAATGTGGGC GGGCGACTTA AAAAACTGGA GCTTAAAAAC
TACCGTGAAA CCCTTAAGGA GGATTCAGGG CTTGTTACTC TGGTCGATGC CGATAATGCA
CTAAGCACTT TCGGTATTCT TGGTCAAGGG GATATAGCCC TGGCTGAGAA CACGGTCTAT
GCGACAGATG TCCCTGCCGA AGGATTAACT CTCGGTTCCG ATGATAAAAA AGATCTTCGC
TTTACGGCCG TTCTGAGCAA TGGCGTGGTT GTGGAGAAGG TCTTTTCACT TAACGGTAAA
GGATACGATT TTAATCTTCA GGTCCGGGTA GTTAATCCGG GAGACAGACC TATTCAGGGT
AGTCTGGAAC TCTTGATGGT TCAGCCCTGG TCGGAAGATC GTGAGGGTTC CCGGTATTCC
TTCGTCGGGC CGGCAATTTA CGCGGACGAT GAGCTGAATA CCTATAAGGT CAAGGAACTT
GAGGACGGCG CCATCCGGCA TGATAACAGT GGTATCTGGA CCGCATTTGA AGACAAGTAT
TTCATGACGG CCGCTGTACC TCTCCGGTCC GAACAACATG CCTTTGTTTT GGAAAAGGTC
GGCAATGCCG TCAAAAACAT CGTATCCAGC GGAAACTTAT CGGTAGGTGG GCAACAATCG
GTGACTCTCG ATTATCTGCT GTATGCCGGG CCCCGCGACC TGGATGTTCT GGAGCAGGTT
AATCATGGTC TGGACAAGGC GATAGATTTC GGTTTTTTCG ATATGCTCGC CCGACCCTTG
CTTTCCGTTC TTAAATTTTG TCATAAAAAT TTAATATCAA ACTACGGCGT GGCGATTATT
CTGCTCACGG TGTTCATAAA AGTTCTCTTT TGGCCCCTGA CGCATAAAAG TTACAAATCC
ATGCGCGATA TGCAGAAGCT ACAACCGGAG ATGCAGCGGT TGCGCGAAAA ATATAAAAAA
GATAAAGAGC GCATGAATCG CGAGATCATG GAATTGTATC GTAAAAACCG TGTTAACCCC
ATGGGCGGTT GTTTGCCCAT GTTCGCGCAG ATCCCGGTTT TCTTCGCTTT ATATAAAGTG
TTGTTGGGAT CCATTGCTCT TCGTCATGAG CCTTTTATTT TCTGGATTCA AGATTTGGCT
GCCAAGGATC CTTATTACAT TACCCCTTTG ATTATGGGGG TTACTATGTT CTTTCAGCAA
AAAATGAGTC CTACCACCAT GGATTCCCAG CAAGCCAAAA TCATGTTGTT CATGCCGGTT
ATTTTCACCT TTATGTTCCT TAATTTCCCC TCCGGCCTGG TTATCTACTG GTTGGTAAAC
AATGTTCTTA CCATAGCCCA GCAGTGGTTC ATTAATCGTG AAGGGGGGCA ACCGGTCAAG
GCCGGTTGA
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| Protein sequence | MENKNVIIAL LLMVLIWTGY TTFFVKPAPA PVNDEPAVAE SFPAVTPEVV GERVVPSVDH
VMAAAASSDI APRDFVVDTE DFRAVFTNVG GRLKKLELKN YRETLKEDSG LVTLVDADNA
LSTFGILGQG DIALAENTVY ATDVPAEGLT LGSDDKKDLR FTAVLSNGVV VEKVFSLNGK
GYDFNLQVRV VNPGDRPIQG SLELLMVQPW SEDREGSRYS FVGPAIYADD ELNTYKVKEL
EDGAIRHDNS GIWTAFEDKY FMTAAVPLRS EQHAFVLEKV GNAVKNIVSS GNLSVGGQQS
VTLDYLLYAG PRDLDVLEQV NHGLDKAIDF GFFDMLARPL LSVLKFCHKN LISNYGVAII
LLTVFIKVLF WPLTHKSYKS MRDMQKLQPE MQRLREKYKK DKERMNREIM ELYRKNRVNP
MGGCLPMFAQ IPVFFALYKV LLGSIALRHE PFIFWIQDLA AKDPYYITPL IMGVTMFFQQ
KMSPTTMDSQ QAKIMLFMPV IFTFMFLNFP SGLVIYWLVN NVLTIAQQWF INREGGQPVK
AG
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