Gene Pcar_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3129 
SymboldinP 
ID3725837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3649059 
End bp3650258 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content54% 
IMG OID637752741 
Productdamage-inducible protein DinP 
Protein accessionYP_358534 
Protein GI77920719 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGGGA CGCAGCCCGA AAAACGCATC ATCCTGCATC TGGATATGGA CGCTTTTTAC 
GCAAGCGTCG AGCAGCTGGA TAGTCCGGAG CTGAAAGGAC AACCGGTTGT GGTCGGCGGG
CATCGTTCGC GTGGGGTGGT GTGCGCCTGT TCCTATGAAG CCAGAACTTT CGGCATTCAT
TCTGCCATGC CCATGAGCCG TGCACTTCGA TTGTGTCCAC AGGCCATCGT GCAACCGGTA
CGGATGGCCA GGTATCAGGA AATCTCACGG CAGGTGTTCG ATATATTCGG TCGGTACACA
GACCTGGTTG AACCCTTATC GGTGGATGAG GCGTTTCTCG ATGTTACCGC CAGTCGACGT
CTTTTTGGCG AAGGCTGGGA TATTGCCGAA AAAATCCGTC GGGATGTCAG GGATGAACTG
GGACTGCCCA TCAGTGCGGG TATTGCACCG AATAAATTCC TGGCCAAATT GGCTTCGGAG
CAGGCTAAAC CGGATGGTGT TTTTCAGGTA CCGGAACGGG TGGATGATTT TCTACTGTCA
TTGCCCCTGA AGCGGCTATG GGGGGTGGGC CCGGTGCTGT TGAAGTCTTT GCAGAAAATG
GGGTTGCGGA CGGTGGCCGA TTTACGCCAT ATGGATCGTG CTGATATGGA ACGGTGCTTC
GGGCAGGCCG GTGAGCGGCT TATACAATTG GCGCATGGAG AGGATGAACG ACCGGTAGAA
CCGCAACGCA GCCTCAAATC TATTGGTCAT GAGGATACAT TTGACCAGGA TATTTTTGAA
CGTGAAACAA TGCATGTGGC GCTTCTTGAT CTGGTGGAGC GGGTGGCGGC ACGTTTAAGA
AAGCATGGTC TGATCGGTAC AACCCTTACA CTCAAGGTGA AATATGCAGA TTTTTCGACA
GTAACACGTT CCAGAAGTGT TGCGGATGGG ATCTGCCATG CCAGGGACAT GCTGCACCTG
GCGAAGCAAC TGCTGGAGAA GACAGAGGCC GGGAAAAAAC CGGTGCGCCT GCTTGGCGTC
AGCCTGGCCA ATTTGATGGA TGCAGACAGC GGACAGGGTT TATTGTTCGA TGAAGATCGC
CGGAACCAGC TGAAAGGTTT GGAACAGGCC ATGGATCACG TGCGAGAAAG GTACGGCGAA
AAAGGGCTCT GTCGTGCAAC CCTGGTAGGA CATCGCCGAA GGAGTTTAAC GCGGGAGTAA
 
Protein sequence
MSGTQPEKRI ILHLDMDAFY ASVEQLDSPE LKGQPVVVGG HRSRGVVCAC SYEARTFGIH 
SAMPMSRALR LCPQAIVQPV RMARYQEISR QVFDIFGRYT DLVEPLSVDE AFLDVTASRR
LFGEGWDIAE KIRRDVRDEL GLPISAGIAP NKFLAKLASE QAKPDGVFQV PERVDDFLLS
LPLKRLWGVG PVLLKSLQKM GLRTVADLRH MDRADMERCF GQAGERLIQL AHGEDERPVE
PQRSLKSIGH EDTFDQDIFE RETMHVALLD LVERVAARLR KHGLIGTTLT LKVKYADFST
VTRSRSVADG ICHARDMLHL AKQLLEKTEA GKKPVRLLGV SLANLMDADS GQGLLFDEDR
RNQLKGLEQA MDHVRERYGE KGLCRATLVG HRRRSLTRE