| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3128 |
|---|
| Symbol | |
|---|
| ID | 3725836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter carbinolicus DSM 2380 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007498 |
|---|
| Strand | + |
|---|
| Start bp | 3648300 |
|---|
| End bp | 3649073 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637752740 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_358533 |
|---|
| Protein GI | 77920718 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 80 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATC CAATGCATGT TCATATCCCG TTCAGCCAAT GGGATCAGCA CTTTCCCCTG
CTGCTGAAAC ACCGTCTGCA ACCTGAACTC GCTTTTAAAT GGCCCGATCT CGATCCGTCG
TTACTGCCGG CCGTCAAACG AGCCGGCCAA CAGCTCGCCG AAGAGGGGCT TGGCGTGACG
GTACATGCCC CCTTTATGGA TCTCAACCCC GGAGCGATAG AACCCCTGGT TCGGGAAGCG
ACGCGTCAGC GCTGGATGCA GACCCTGGAG GTTGCCGAAC TCCTTCAGGC TCGACTGGTG
GTCCTTCATC CCGGCTTTGA TCGCTGGCGT TACGGTGGCC AGAGTCAACC CTGGATCGAT
GCCTGCCTGG ACTTTTTACC GCCCCTTCTG GAACAGGCTG CAAGCCAGGA GTGCCTGCTG
GTGCTGGAAA ATATTTTCGA GGAAACTCCC GATACGCTGG CGGCGGTATT GAAGACCCTC
GATTCGCCAT GGCTGGGTCA TTGCTTCGAT GCCGGACACT GGAACCTGTT TGCCAAGTGT
TCCATGGAGC AGTGGTTTGA GGCTCTTGCA CCCTGGATAC GTCATCTGCA TATTCACGAC
AACAGCGGCG ATCGCGATGC CCATCTGGCG ATAGGGGAGG GGAACATCGA TTTTCCTCTG
CTTTTCGATT ATATGAAAAA TCTGCAAAGC TCACCCAGCA TGACCCTTGA GATCCATGAC
TGTGAAGCTC TTTTGCGCTG TGTCGGCAGT GTCAAATCGT TACTCCCGCG TTAA
|
|---|
| Protein sequence | MRDPMHVHIP FSQWDQHFPL LLKHRLQPEL AFKWPDLDPS LLPAVKRAGQ QLAEEGLGVT
VHAPFMDLNP GAIEPLVREA TRQRWMQTLE VAELLQARLV VLHPGFDRWR YGGQSQPWID
ACLDFLPPLL EQAASQECLL VLENIFEETP DTLAAVLKTL DSPWLGHCFD AGHWNLFAKC
SMEQWFEALA PWIRHLHIHD NSGDRDAHLA IGEGNIDFPL LFDYMKNLQS SPSMTLEIHD
CEALLRCVGS VKSLLPR
|
|---|
| |