| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3115 |
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| Symbol | serA-2 |
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| ID | 3725823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3632946 |
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| End bp | 3634553 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637752727 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_358520 |
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| Protein GI | 77920705 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00187643 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGTCC TTATTACCGA CGAAATTTCC CAGGAAGGTC TGCAACCGCT ACTCGATGAT
CCGCGTATTG AGATCGAAGT ACGCCTGGGA CTTGCTCCTG AAGAACTGTA TCGCATTGTC
GGCCGCTTCG ACGCGCTCAT CACCCGCAGC GGCACCACGG TCGACGAGGC CCTGCTCGAA
CACTGCCGCA ATCTTAAAAT CGTCGCCCGC GCCGGTGTCG GCATCGATAA CGTCGATGTC
GATGCGGCCA GCAGCCGCGG CATCATTGTG GTCAACGCCC CCTACGGCAA CGTCAACTCC
GCAGCCGAGC ACACCATGGC CGTCATGTTG TCCTTATGCC GCAACGTGCC CGTGGCCAAC
ACTTCCCTGA AACAGGGCGA ATGGCAGCGC GCTCCTTTTA CCGGCTGCGA ACTCAAGGAC
AAAACCCTCG GCATCATCGG CCTGGGAAAG GTCGGGGGAC GTGTAGCGCT GCGGGCCAAG
GCATTTGAAA TGAATGTCAT TGCCTGCGAT CCGTACATTT CACCCAAACG CGCCGAGGAC
CTCGGCGTCA AACTGGTGAG TAAAGAGGAT ATCGTACGTT ATGCCGATAT CATCACTCTG
CATTGCCCCC GCAATGAAGA AACCATCGAC ATGCTCAACG CCCGTCATTT CGATGCCATG
AAGGACGGCG TGATCATCGT CAATGTCGCG CGGGGTGAAA TCGTCAACGA AGCCGCCATG
CTTGCCGCCA TGCAAAGCGG CAAAGTGCGC GGCGCGGCTT TCGATGTCTT CAGCGAAGAA
CCGCCGCGCT CGGATCTGGT CAAACAGCTT ATCGCTCATC CGCGCATGAT TGTCACGCCC
CATTTGGGTG CCAACACCTT CGAGGCGCAG AAAAACGTGG CGGTCGATGT CAGCAAAGAG
ATCGTTCGCT ATCTGGATGG CCAACCCCTG GACAGCGCCG TCAATATCCC CAGATTCGAT
GCCGACCTGA TGCAGGTCAT GCAGCCGTTT TTGTCGTTGA TTCAGCAAAT GGGCGAATTC
ATCGTGCAAC TGGCGCCGGC CAACCCCAGC AAGGTGACCT TCTCCTACAA CGGCAAACTG
GCTCGTTACG ATTGTGCCCC GCTGACCGTC TGCGGCCTGG CCTCGCTGCT CAACCGCTCC
ACCGAGCAGG ATGTCAACAT GGTTAATTCC CAGCTGATCG CCGAACAGAT GGGCATCTCC
GTCGAAACGG TGTGCTCCAC CGAAGCGGAG TCTTTTTCCA ATCTCATCAC CATCACCATG
ACGACCCCTG CCGGCAAACG CACGGTAGCC GGGACCATCT TCGAAGGCAT CCCCAAAATC
GTCAAGATGC GCGATTTCAA TACGGATTTT CAGCCCGAAG AGCACATGCT GGTGATCAGC
TATGCGGACA AGCCGGGTTT GATCGGAAAA ATCGGCACCA TCCTCGGCGA AGCCGGCATC
AATATCGGCT CCATGAACCT GGGACGCCGT GCCAAATCCG GTGAAGCCAT GGTAGTGCTG
TCCCTCGACA CCCCGGCACC GGCCGAGGTT CTCGAGCAGC TCGCCACCAG TATCGATGCC
GCGTTCATTC GCAGCATCCA CATGGAAAAC GGGATCTGCG ACAATTAA
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| Protein sequence | MKVLITDEIS QEGLQPLLDD PRIEIEVRLG LAPEELYRIV GRFDALITRS GTTVDEALLE
HCRNLKIVAR AGVGIDNVDV DAASSRGIIV VNAPYGNVNS AAEHTMAVML SLCRNVPVAN
TSLKQGEWQR APFTGCELKD KTLGIIGLGK VGGRVALRAK AFEMNVIACD PYISPKRAED
LGVKLVSKED IVRYADIITL HCPRNEETID MLNARHFDAM KDGVIIVNVA RGEIVNEAAM
LAAMQSGKVR GAAFDVFSEE PPRSDLVKQL IAHPRMIVTP HLGANTFEAQ KNVAVDVSKE
IVRYLDGQPL DSAVNIPRFD ADLMQVMQPF LSLIQQMGEF IVQLAPANPS KVTFSYNGKL
ARYDCAPLTV CGLASLLNRS TEQDVNMVNS QLIAEQMGIS VETVCSTEAE SFSNLITITM
TTPAGKRTVA GTIFEGIPKI VKMRDFNTDF QPEEHMLVIS YADKPGLIGK IGTILGEAGI
NIGSMNLGRR AKSGEAMVVL SLDTPAPAEV LEQLATSIDA AFIRSIHMEN GICDN
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