Gene Pcar_3111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3111 
Symbol 
ID3725819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3628311 
End bp3629573 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content58% 
IMG OID637752723 
Producttrehalose phosphorylase/synthase 
Protein accessionYP_358516 
Protein GI77920701 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCCCCC CTCACGACGA CCAAAACCGG GATTTCCTTG AACAGTATGC TTCTGTGACG 
GGGTCCGCCG TCATTCAGCA TCTTGAGCAA CTGGCAGCGC CCCTCAGAGG CGCCCGGGTC
GTGCATGTCA ATTCCACCCG CGAAGGCGGA GGAGTGGCGG AAATTCTGCA AAAGCTGATC
CCATTGAAAA GGGCCCTGGG TATCGACGCA AGCTGGGAGG TTATCAACGG TTCGCCGGCT
TTTTACGAAT GTACCAAAAG CTTTCATAAT GCCCTGCAGG GCATGCACAT AAAAATTCCC
CGGAATTTGT TATCCGCCTA CGAGCAGACC AACGAACAAG GCGCCGAACA GTTAAGAGAT
GTTCTTGCAC AGGCGGATTT CGTCTTCATT CATGACCCCC AGCCGGCCGC ACTGCTGTCC
CATTTTCCCG AACGACGCGG CAAATGGATC TGGCGCTGTC ATATCGACGC CAGACATCCG
TATCGCACAG TCTGGAAATA CCTGCGCCCG TGGCTGGCCG CTTACGATGC CAGTATCTTT
TCCCTGCCGG AATTCGCCCA GCCGTTGCCG CATCCCCAAT ACATCATTGC ACCGAGTATC
GACCCGTTAA GCGAAAAGAA CCGCGCCCTG CCCACGGCGG ACATCGAAGC GGTGTACGGA
CAATTCGGCA TCGATCCGGA ACGGCCCATG GTGCTGCAGG TCTCCCGCTA CGATCGGTTC
AAGGACCCTC TGGGCGTTAT TCAGGCCTTC AATCTAGCCG CCAAATTGAC CCCCCTGCAG
CTGGTTCTGG CTGGTGGTGG GGCGAGCGAC GATCCGGAAG GGCAGGCGAT TCTTCAGGAG
GTACAGCAGG CGGCGGAAGG TCATCCGGAT ATTCATGTTT TGCTGCTGCC TTCGGATGCC
CACCGTACCA TCAATGCTCT GCAGCGAGCC GCAGACATCG TTATCCAGAA ATCGATCCGG
GAGGGTTTCG GTTTGACCGT AACGGAAGGC ATGTGGAAGG GCAAACCGGT CATAGGCGGC
GACACCGGTG GGATCCGGTT GCAGGTGTTC AATCACTATA CCGGGTTTCT GGTTCGCACG
CCGGAAGGCG CGGCTCTGCG CATGCGGTAC CTACTTCATC GTACCCACCT GCGCCAACAG
ATGGGCGAAC GGGCCCGCCA GTTCGTCATG GACAATTTTC TCATAACCCG CCACCTGCGG
GAATATCTGA CCTTACTGGT CGGCCTGCAA GGCAGTTGTG AGGAGCGGGT CGTTGTCGGT
TGA
 
Protein sequence
MCPPHDDQNR DFLEQYASVT GSAVIQHLEQ LAAPLRGARV VHVNSTREGG GVAEILQKLI 
PLKRALGIDA SWEVINGSPA FYECTKSFHN ALQGMHIKIP RNLLSAYEQT NEQGAEQLRD
VLAQADFVFI HDPQPAALLS HFPERRGKWI WRCHIDARHP YRTVWKYLRP WLAAYDASIF
SLPEFAQPLP HPQYIIAPSI DPLSEKNRAL PTADIEAVYG QFGIDPERPM VLQVSRYDRF
KDPLGVIQAF NLAAKLTPLQ LVLAGGGASD DPEGQAILQE VQQAAEGHPD IHVLLLPSDA
HRTINALQRA ADIVIQKSIR EGFGLTVTEG MWKGKPVIGG DTGGIRLQVF NHYTGFLVRT
PEGAALRMRY LLHRTHLRQQ MGERARQFVM DNFLITRHLR EYLTLLVGLQ GSCEERVVVG