| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcar_3092 |
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| Symbol | cydB |
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| ID | 3725799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter carbinolicus DSM 2380 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007498 |
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| Strand | + |
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| Start bp | 3606416 |
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| End bp | 3607444 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637752703 |
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| Product | cytochrome d ubiquinol oxidase, subunit II |
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| Protein accession | YP_358497 |
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| Protein GI | 77920682 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1294] Cytochrome bd-type quinol oxidase, subunit 2 |
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| TIGRFAM ID | [TIGR00203] cytochrome d oxidase, subunit II (cydB) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0000000000582021 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTTC AGGTGATCTG GTTTGCCCTG TGGGGTTTGT TGTGGGCCCT GTACTTTATG
CTCGACGGAT TTACCCTCGG GGCCGGTATG CTGCACAAAT TCATCGCCCG CGACGACGCG
CAGCGTCAAC AGGTGATCCG CACTTTCGGC CCGGTCTGGG ACGGTAACGA GGTCTGGCTG
ATCACGGCAG GCGGCGCCAC CTTCGCGGCC TTTCCCACCA CCTATGCGCT GATGTTCAGT
TACCTGTATG CCCCGTTGCT GCTGTTGCTG TTCGGCCTCA TCGTGCGCGG CGTCTCCTTT
GAGTTTCGCG GCCTGAACCC CGGACCGGGC TGGAGAAACG GTTGGGACTG GGCCATCGTT
CTGTCCAGTC TGGTCATTAC CCTGCTGTTC GGAGTGGCCT TCGGCAACAT CTTCCGGGGG
TTGCCCATGG ATGCCGCCGG CTATCACGGC TCGCTGCCGG CGCTGCTCAA CCCTTATGGG
CTTTTGACCG GGGTGCTTTT CATCATGCTG TTTCTGCAGC ACGGTGCGCT GTATCTGGCC
ATCAAGACCA GCGGCGATCT GCAGGAAAGG GCAAAACGCA CAGCCCGCAC CCTTTGGCCC
TATATGCTGG CGACCGCCGT CGCCTTTCTG GCCTTCACCG CGCCGGCTAC GGCCTTGTAC
GAAAACTTTC AAGCCTCGCC GTCGTTATGG GTGGTGCCGC TGATGGCGGC ATTGGAACTG
CTGGCGGTGC GCCTTTTGGT CGCGCAGAAC AAATGGCTGC AGGCCTTCGC CGCATCCTGC
GCCGCCATCG TGCTGGTGGT GGCAACCGGC ATCATCGGGC TGTTCCCGAA CCTTATCCCC
TCCAGCCTCG ATCCGGCCTA CAGCCTGAGC CTGTCCAACT CCTCCTCAAG CCCTTACACC
TTGCATATCA TGACGGTGGT GGTGGCCATC TTTGTGCCCA TCGTCATCGC CTACAAGATC
TGGATCTACC GCATCTTCCG CGGCCCGGTC AGTGACGCAG CCGAAGAAGG TATCGGCGGT
AATTACTGA
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| Protein sequence | MTLQVIWFAL WGLLWALYFM LDGFTLGAGM LHKFIARDDA QRQQVIRTFG PVWDGNEVWL
ITAGGATFAA FPTTYALMFS YLYAPLLLLL FGLIVRGVSF EFRGLNPGPG WRNGWDWAIV
LSSLVITLLF GVAFGNIFRG LPMDAAGYHG SLPALLNPYG LLTGVLFIML FLQHGALYLA
IKTSGDLQER AKRTARTLWP YMLATAVAFL AFTAPATALY ENFQASPSLW VVPLMAALEL
LAVRLLVAQN KWLQAFAASC AAIVLVVATG IIGLFPNLIP SSLDPAYSLS LSNSSSSPYT
LHIMTVVVAI FVPIVIAYKI WIYRIFRGPV SDAAEEGIGG NY
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