Gene Pcar_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcar_3079 
Symbol 
ID3725786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter carbinolicus DSM 2380 
KingdomBacteria 
Replicon accessionNC_007498 
Strand
Start bp3592016 
End bp3592750 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content61% 
IMG OID637752690 
Producthypothetical protein 
Protein accessionYP_358484 
Protein GI77920669 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGCT TTTTTATCGC TCCGGATGTC TTGCGGCACG ATCACATCGC TTTGACCGAT 
GAGATTCTGC GGCACATGGC GGTACTGCGC CTTGCCAGGG GAGCGGAAAT TCTGTTGCTT
GACGGCCTCG GTAATCTCTG TCATTGCCGC ATCGATCATC TGGACCGCAA ATCCGGTTCG
GCCATGGTGC TGAGCCGTTG CACTCAGCAG GAGACGGCTT TTCCCGTGGA GCTTATGCAG
GCCCTGCCCA AGGCTGACAA AATGGAGCTG GTGCTGCAAA AGGGCACCGA ATTGGGCATT
ACAGGGTTCA CCCCGCTGCA GACCAGTCGC AGCGTTCCAA GACTTAAACC CGAGCGCGAG
ACACAACGGC ATCAACGCTG GCTGCGCATC ATTCGTGAAG CGGCGCGTCA ATGCCGGCGG
CCGCTGTTGC CGTCCCTGGC TGCGATCCGC CCGCTGGATG AGGCCCTTGG CCAATGTCGG
AGCGAACTGC GTCTGATGCT GTGGGAAGAA GGCAGCCAAC CCCTGGATGC GGTGCTGCCG
GAGCGGATTC CGGCCGGAGC AGCCGTCCTG ATCGGACCGG AAGGCGGATT TTCCCGGGAA
GAAGCCGAGA CGGCCAGACA GCACGGGTTT GTCCCGGTCT TGTTCGGTCC GCGTATTTTG
CGCAGCGAGA CCGCCGGATT CGCTGCTGCA ACCATACTGC AATACCGTTA TGGCGACCTG
GCTGGCAGAG TTTGA
 
Protein sequence
MHRFFIAPDV LRHDHIALTD EILRHMAVLR LARGAEILLL DGLGNLCHCR IDHLDRKSGS 
AMVLSRCTQQ ETAFPVELMQ ALPKADKMEL VLQKGTELGI TGFTPLQTSR SVPRLKPERE
TQRHQRWLRI IREAARQCRR PLLPSLAAIR PLDEALGQCR SELRLMLWEE GSQPLDAVLP
ERIPAGAAVL IGPEGGFSRE EAETARQHGF VPVLFGPRIL RSETAGFAAA TILQYRYGDL
AGRV